RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 APOC2P02655 101 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 PYGMP11217 842 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 CCNB1P14635 433 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 HOXD12P35452 270 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 SCNN1BP51168 640 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 NEK3P51956 506 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 AP1S1P61966 158 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 LPAL2Q16609 132 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 MEI1Q5TIA1 1274 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 LYSMD4Q5XG99 296 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 NEK5Q6P3R8 708 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 FBXL19Q6PCT2 694 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 OR6K2Q8NGY2 324 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 OR14C36Q8NHC7 312 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 RAB7BQ96AH8 199 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 ARRDC3Q96B67 414 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 MGME1Q9BQP7 344 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 HEMGNQ9BXL5 484 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 ATP13A3Q9H7F0 1226 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 RBM22Q9NW64 420 aaKnown RBP eCLIP14.45□□□□□ -0.1
NUP54-216ENST00000514901 NCDNQ9UBB6 729 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 SERGEFQ9UGK8 458 aa14.45□□□□□ -0.1
NUP54-216ENST00000514901 PACSIN2Q9UNF0 486 aaPredicted RBP14.45□□□□□ -0.1
NUP54-216ENST00000514901 A0A1W2PQ67 120 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 GOLGA6L9A6NEM1 432 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 HACD1B0YJ81 288 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 MTSS1O43312 755 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 PLRG1O43660 514 aaKnown RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 ZNF189O75820 626 aaPredicted RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 UGT2B4P06133 528 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 MSNP26038 577 aaKnown RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 SERPINA4P29622 427 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 CCR5P51681 352 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 SUOXP51687 545 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 ADPRHP54922 357 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 IFI35P80217 286 aaPredicted RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 AP1B1Q10567 949 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 XRCC4Q13426 336 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 LLGL1Q15334 1064 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 POM121L1PQ3SYA9 428 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 AGBL4Q5VU57 503 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 NPNTQ6UXI9 565 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 ASCL5Q7RTU5 278 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 RABEPKQ7Z6M1 372 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 REXO1L1PQ8IX06 675 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 GPR161Q8N6U8 529 aaKnown RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 TFB1MQ8WVM0 346 aaKnown RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 EXOC2Q96KP1 924 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 KLHL32Q96NJ5 620 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 NUDCD1Q96RS6 583 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 LGMNQ99538 433 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 FERMT1Q9BQL6 677 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 POLR1EQ9GZS1 481 aaKnown RBP14.44□□□□□ -0.1
NUP54-216ENST00000514901 SUV39H2Q9H5I1 410 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 PREBQ9HCU5 417 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 SCUBE2Q9NQ36 999 aa14.44□□□□□ -0.1
NUP54-216ENST00000514901 CEP192Q8TEP8 1941 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3DA0A087WVF3 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3IA0A087WXS9 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3EA0A087X179 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3KA0A087X1G2 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 BCLAF3A2AJT9 711 aaKnown RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3FA6NER0 549 aaPredicted RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 C16orf96A6NNT2 1141 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 MEI4A8MW99 385 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3LB9A6J9 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 MUSKO15146 869 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 INSIG1O15503 277 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 AP1G1O43747 822 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 FOXD2O60548 495 aaPredicted RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 GFRA3O60609 400 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 JCHAINP01591 159 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3HP0C7X1 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 ADRB3P13945 408 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 CR2P20023 1033 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 GKP32189 559 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 NUDT1P36639 197 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 PI4KAP42356 2102 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 PTGER3P43115 390 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 METAP1P53582 386 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 POLR2LP62875 67 aaKnown RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 CREB5Q02930 508 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 BCL2L1Q07817 233 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 ADCY2Q08462 1091 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 CFAP58Q5T655 872 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 PIP5KL1Q5T9C9 394 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 SEL1L2Q5TEA6 688 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 DCAF12L1Q5VU92 463 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 KIAA0895LQ68EN5 471 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3GQ6DHY5 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3CQ6IPX1 549 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 NCEH1Q6PIU2 408 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 BRAT1Q6PJG6 821 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 CYP2U1Q7Z449 544 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 ZSCAN30Q86W11 494 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 SYT12Q8IV01 421 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 SLC41A1Q8IVJ1 513 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TBC1D3Q8IZP1 549 aaPredicted RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 DEFB119Q8N690 84 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 TTC13Q8NBP0 860 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms