RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EIF2B3Q9NR50 452 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 CACNA2D2Q9NY47 1150 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 HECAQ9UBI9 543 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 AAR2Q9Y312 384 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 PLXND1Q9Y4D7 1925 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 ZDBF2Q9HCK1 2354 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 A0A1W2PQF6 199 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 TSPAN11A1L157 253 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 GOLGA6CA6NDK9 693 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 GOLGA6BA6NDN3 693 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 ANTXRLA6NF34 631 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SMAPO00193 183 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 NDC80O14777 642 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 TTI1O43156 1089 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 PSMD3O43242 534 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 HTRA2O43464 458 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 RAD51CO43502 376 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 PAPSS2O95340 614 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SLU7O95391 586 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 IFNB1P01574 187 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 EPOP01588 193 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 PRNPP04156 253 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 EPHX1P07099 455 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SERPINF2P08697 491 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 GOLGA6DP0CG33 693 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 IVDP26440 423 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 NUMBP49757 651 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 NRLP54845 237 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SEC13P55735 322 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SKOR1P84550 965 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 CDK16Q00536 496 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 NIPAL4Q0D2K0 466 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 MPP3Q13368 585 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 STARD3Q14849 445 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 KCTD11Q693B1 232 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 CWF19L1Q69YN2 538 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 DPY19L3Q6ZPD9 716 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 DSG4Q86SJ6 1040 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SPEM1Q8N4L4 309 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 TXNDC5Q8NBS9 432 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 NOA1Q8NC60 698 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 RPLP0P6Q8NHW5 317 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 OR8D1Q8WZ84 308 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 LRRC45Q96CN5 670 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 ECHDC3Q96DC8 303 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 FAM129BQ96TA1 746 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 GORASP1Q9BQQ3 440 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 RSPH9Q9H1X1 276 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 TNKS2Q9H2K2 1166 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 RRAGDQ9NQL2 400 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 GOLGA6AQ9NYA3 693 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 RSPH14Q9UHP6 348 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 PPM1HQ9ULR3 514 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 WASF2Q9Y6W5 498 aa12.12□□□□□ -0.47
PDLIM5-220ENST00000514830 EFCAB8A8MWE9 144 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 TRAFD1O14545 582 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 FZD6O60353 706 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 SYNCRIPO60506 623 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 SIN3BO75182 1162 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 SUN1O94901 812 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 METTL18O95568 372 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 ZSCAN5DPP0CG00 497 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 HLA-EP13747 358 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 HOXB2P14652 356 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 ETS1P14921 441 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 AOC1P19801 751 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 CA4P22748 312 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 PSMB4P28070 264 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 SCNN1BP51168 640 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 DGKEP52429 567 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 GEMP55040 296 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 MAXP61244 160 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 DSC2Q02487 901 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 ZBTB16Q05516 673 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 CBLBQ13191 982 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 GAS6Q14393 721 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 IHHQ14623 411 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 CRY1Q16526 586 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 ATXN7L2Q5T6C5 722 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 KDELC1Q6UW63 502 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 PCGF5Q86SE9 256 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 OR2T3Q8NH03 318 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 OXNAD1Q96HP4 312 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 FEM1CQ96JP0 617 aa12.11□□□□□ -0.47
PDLIM5-220ENST00000514830 NSMCE3Q96MG7 304 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms