RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 MRPS17Q9Y2R5 130 aaKnown RBP6.73□□□□□ -1.33
HMGN1P17-201ENST00000513734 DOCK9Q9BZ29 2069 aa6.73□□□□□ -1.33
HMGN1P17-201ENST00000513734 TRAV19A0A0A6YYK7 116 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 MED19A0JLT2 244 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 NCAM2O15394 837 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 RFPL1O75677 317 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 BEST1O76090 585 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 RPN1P04843 607 aaKnown RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 CCDC130P13994 396 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 PI3P19957 117 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 C5AR1P21730 350 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 GNL1P36915 607 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 MAGEA9P43362 315 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 RPL10AP62906 217 aaKnown RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 TNNC1P63316 161 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 PPP3CAQ08209 521 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 BIRC3Q13489 604 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 SURF1Q15526 300 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 CCDC6Q16204 474 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 ZNF699Q32M78 642 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 TMEM196Q5HYL7 178 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 MBNL2Q5VZF2 373 aaKnown RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 GPRIN1Q7Z2K8 1008 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 ACOT1Q86TX2 421 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 RALGPS2Q86X27 583 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 SPEM1Q8N4L4 309 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 B3GALNT2Q8NCR0 500 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 SPATA18Q8TC71 538 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 TSPEARQ8WU66 669 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 ATRIPQ8WXE1 791 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 RUBCNQ92622 972 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 HIST1H2AHQ96KK5 128 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 PWWP2AQ96N64 755 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 HIST1H2AJQ99878 128 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 SNX25Q9H3E2 840 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 C8orf33Q9H7E9 229 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 KIAA1586Q9HCI6 787 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 ZDHHC4Q9NPG8 344 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 FAM49BQ9NUQ9 324 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 SMPD4Q9NXE4 827 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 CDC42EP3Q9UKI2 254 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 CHD8Q9HCK8 2581 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 TMEM131Q92545 1883 aa6.72□□□□□ -1.33
HMGN1P17-201ENST00000513734 CACNA1EQ15878 2313 aa6.71□□□□□ -1.33
HMGN1P17-201ENST00000513734 KNL1Q8NG31 2342 aa6.71□□□□□ -1.33
HMGN1P17-201ENST00000513734 A0A0G2JNJ9 132 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 FAM237AA0A1B0GTK4 181 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ZNF840PA6NDX5 716 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 A8MXQ7 604 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 LEFTY2O00292 366 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 NDUFS2O75306 463 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 TACC1O75410 805 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 AKAP3O75969 853 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 OAS1P00973 400 aaKnown RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 HLA-DRAP01903 254 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 HNRNPLP14866 589 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 HDCP19113 662 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 DDX6P26196 483 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 OPRD1P41143 372 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 SYKP43405 635 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 CXCL12P48061 93 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 CCR3P51677 355 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 NDST1P52848 882 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 TAF10Q12962 218 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 TRPC3Q13507 836 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 PNOCQ13519 176 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ZNF268Q14587 947 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 MLC1Q15049 377 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ZACNQ401N2 412 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ZCWPW2Q504Y3 356 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ATL3Q6DD88 541 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ATG14Q6ZNE5 492 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 KRBA2Q6ZNG9 492 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 C4orf50Q6ZRC1 276 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 DENND5BQ6ZUT9 1274 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 C14orf80Q86SX3 495 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 FUKQ8N0W3 1084 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 C12orf29Q8N999 325 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 SEMA4DQ92854 862 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 P2RY11Q96G91 374 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 SPATA17Q96L03 361 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 SMOQ99835 787 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 TTLL2Q9BWV7 592 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ACE2Q9BYF1 805 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 MMRN2Q9H8L6 949 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ECT2Q9H8V3 914 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 DUS2Q9NX74 493 aaKnown RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 NCDNQ9UBB6 729 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 SAE1Q9UBE0 346 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 UXTQ9UBK9 157 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 Q9UFV3 132 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 EVLQ9UI08 416 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 CFAP45Q9UL16 551 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 CNOT6Q9ULM6 557 aaKnown RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 MUC22E2RYF6 1773 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 PCNX2A6NKB5 2137 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 CACNA1BQ00975 2339 aa6.71□□□□□ -1.34
HMGN1P17-201ENST00000513734 ACACBO00763 2458 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms