RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ALG14Q96F25 216 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 GCNAQ96QF7 691 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 SLC22A12Q96S37 553 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 SRPK1Q96SB4 655 aaKnown RBP8.47□□□□□ -1.05
RNF4-220ENST00000513578 SEMA3CQ99985 751 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 TCF25Q9BQ70 676 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 APOL2Q9BQE5 337 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 TLR9Q9NR96 1032 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 C20orf96Q9NUD7 363 aaPredicted RBP8.47□□□□□ -1.05
RNF4-220ENST00000513578 PIH1D1Q9NWS0 290 aaKnown RBP8.47□□□□□ -1.05
RNF4-220ENST00000513578 TXNDC16Q9P2K2 825 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 UBA2Q9UBT2 640 aaPredicted RBP8.47□□□□□ -1.05
RNF4-220ENST00000513578 GRID1Q9ULK0 1009 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 ARHGAP26Q9UNA1 814 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 OR51B4Q9Y5P0 310 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 CPQQ9Y646 472 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 DOCK6Q96HP0 2047 aa8.47□□□□□ -1.05
RNF4-220ENST00000513578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 E2F8A0AVK6 867 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 LINC01553A4QN01 128 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 GOLGA8RI6L899 631 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 MUSKO15146 869 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 SLC7A4O43246 635 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 EDF1O60869 148 aaKnown RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 TGDSO95455 350 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 NDST3O95803 873 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 ALDOAP04075 364 aaKnown RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 SERPINF2P08697 491 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 PTPN2P17706 415 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CTNNB1P35222 781 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CSNK1DP48730 415 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 SERPINB8P50452 374 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CDK18Q07002 472 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 ITKQ08881 620 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 SLC12A1Q13621 1099 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CYTH1Q15438 398 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 MPPE1Q53F39 396 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 HSP90AA5PQ58FG0 334 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 PPM1LQ5SGD2 360 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 TSTD2Q5T7W7 516 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 MROH9Q5TGP6 573 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 FYB2Q5VWT5 728 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 TXNDC8Q6A555 127 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 IL31Q6EBC2 164 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CES3Q6UWW8 571 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 STRA8Q7Z7C7 330 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 TAX1BP1Q86VP1 789 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 ZNF354CQ86Y25 554 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 GDAP1Q8TB36 358 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 ZNF398Q8TD17 642 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CALML6Q8TD86 181 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 SLC22A17Q8WUG5 538 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 POF1BQ8WVV4 589 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 ZNF75CPQ92670 426 aaPredicted RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 ATP2A3Q93084 1043 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 NUDCD1Q96RS6 583 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 TRIB3Q96RU7 358 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CYP2S1Q96SQ9 504 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 KLF6Q99612 283 aaPredicted RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 GPR22Q99680 433 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 C19orf43Q9BQ61 176 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 FAM167BQ9BTA0 163 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CINPQ9BW66 212 aaPredicted RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 IQCGQ9H095 443 aaKnown RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 RHOJQ9H4E5 214 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 MANSC1Q9H8J5 431 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 MLXIPLQ9NP71 852 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 ASAH2Q9NR71 780 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 SIRPGQ9P1W8 387 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 SLC17A7Q9P2U7 560 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 DPP7Q9UHL4 492 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 PSAT1Q9Y617 370 aa8.46□□□□□ -1.06
RNF4-220ENST00000513578 MKI67P46013 3256 aaKnown RBP8.46□□□□□ -1.06
RNF4-220ENST00000513578 ZNF106Q9H2Y7 1883 aaKnown RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 LCHNA4D1U4 455 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 TPP1O14773 563 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 INSIG1O15503 277 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 TBL1XO60907 577 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 CD160O95971 181 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SPATA31D3P0C874 917 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 IRF1P10914 325 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 COL6A2P12110 1019 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ARNTP27540 789 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 WEE1P30291 646 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SERPINB4P48594 390 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SGSHP51688 502 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 MAXP61244 160 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ARF5P84085 180 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 ZXDBP98169 803 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 CYP4F8P98187 520 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 PDE1BQ01064 536 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 SLC20A2Q08357 652 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 BMPR2Q13873 1038 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 PDE1CQ14123 709 aaPredicted RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 POU6F1Q14863 301 aa8.45□□□□□ -1.06
RNF4-220ENST00000513578 LACTB2Q53H82 288 aaPredicted RBP8.45□□□□□ -1.06
RNF4-220ENST00000513578 SIRPB2Q5JXA9 342 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms