RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 RBP1P09455 135 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 KCNE1P15382 129 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 NFKB1P19838 968 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 MYF6P23409 242 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 NMBRP28336 390 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 CD151P48509 253 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 TAF6P49848 677 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 CCNA1P78396 465 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 PFKPQ01813 784 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 ADIGQ0VDE8 80 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 BNIP2Q12982 314 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 ITGA7Q13683 1181 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 SPIDRQ14159 915 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 FASTKQ14296 549 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 ZBED5Q49AG3 693 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 COQ5Q5HYK3 327 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 FAM182AQ5T1J6 154 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 REP15Q6BDI9 236 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 KIAA0930Q6ICG6 404 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 NOTUMQ6P988 496 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 ERMP1Q7Z2K6 904 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 AMIGO2Q86SJ2 522 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 HERC6Q8IVU3 1022 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 FBXO16Q8IX29 292 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 ANKRD13AQ8IZ07 590 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 SIX6OS1Q8N1H7 587 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 GALNT4Q8N4A0 578 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 PCYOX1LQ8NBM8 494 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 C2CD4AQ8NCU7 369 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 SHCBP1Q8NEM2 672 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 APPL2Q8NEU8 664 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 PPHLN1Q8NEY8 458 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 OR2T34Q8NGX1 318 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 OR2T3Q8NH03 318 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 FNDC8Q8TC99 324 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 SPPL2BQ8TCT7 592 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 LPGAT1Q92604 370 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 USP13Q92995 863 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNF8-210ENST00000511214 ATP6V1E2Q96A05 226 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 TSPAN17Q96FV3 270 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 ATXN7L3BQ96GX2 97 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 SLC45A3Q96JT2 553 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 ZMAT2Q96NC0 199 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 ASB2Q96Q27 587 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 FCRL5Q96RD9 977 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 NPAS2Q99743 824 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 HOPXQ9BPY8 73 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 TRPV6Q9H1D0 765 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 VTA1Q9NP79 307 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 CD320Q9NPF0 282 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 CHRAC1Q9NRG0 131 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 OLAHQ9NV23 265 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 PIH1D1Q9NWS0 290 aaKnown RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 XPR1Q9UBH6 696 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 RGS17Q9UGC6 210 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 TUBGCP4Q9UGJ1 667 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 CROTQ9UKG9 612 aa9.19□□□□□ -0.94
SNF8-210ENST00000511214 MTF2Q9Y483 593 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.19□□□□□ -0.94
SNF8-210ENST00000511214 A0A0G2JLL6 359 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 FAM95CA0A1B0GW59 222 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 E2F8A0AVK6 867 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 SH3PXD2BA1X283 911 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 RRN3P2A6NIE6 340 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 MRASO14807 208 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 UBDO15205 165 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PHGDHO43175 533 aaKnown RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 HTRA2O43464 458 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 NRP2O60462 931 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 USP2O75604 605 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 TRPA1O75762 1119 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PGK1P00558 417 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 AHSGP02765 367 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 VTNP04004 478 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 FCGR1AP12314 374 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CCNCP24863 283 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 GMPRP36959 345 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TSC2P49815 1807 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CLCN5P51795 746 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 GEMP55040 296 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 NME5P56597 212 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 FOXM1Q08050 763 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 GK3PQ14409 553 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 INPP5AQ14642 412 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 SLC14A2Q15849 920 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 DGKDQ16760 1214 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 FAM83EQ2M2I3 478 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 NHSL2Q5HYW2 709 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TSTD2Q5T7W7 516 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 AGAP9Q5VTM2 703 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TMEM198Q66K66 360 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PM20D1Q6GTS8 502 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 DCLRE1AQ6PJP8 1040 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 Q6ZNX1 250 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms