RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ARRB1P49407 418 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-223ENST00000511081 EMP3P54852 163 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 RPS21P63220 83 aaKnown RBP12.32□□□□□ -0.44
CLDND1-223ENST00000511081 BNIP3Q12983 259 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 FGL2Q14314 439 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 KIAA1161Q6NSJ0 714 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 FBXL19Q6PCT2 694 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 UNQ6494/PRO21346Q6UXR6 183 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 PARS2Q7L3T8 475 aaKnown RBP12.32□□□□□ -0.44
CLDND1-223ENST00000511081 ARHGAP12Q8IWW6 846 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 SNRNP25Q9BV90 132 aaKnown RBP12.32□□□□□ -0.44
CLDND1-223ENST00000511081 OSBPL1AQ9BXW6 950 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 SLC17A9Q9BYT1 436 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 DHX35Q9H5Z1 703 aaKnown RBP12.32□□□□□ -0.44
CLDND1-223ENST00000511081 PDFQ9HBH1 243 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 GPR27Q9NS67 375 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 GPATCH2LQ9NWQ4 482 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 KLK13Q9UKR3 277 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 NENFQ9UMX5 172 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
CLDND1-223ENST00000511081 ZFHX4Q86UP3 3567 aa12.32□□□□□ -0.44
CLDND1-223ENST00000511081 A0A087X0T9 212 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 SPINT1O43278 529 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 PRAMEF11O60813 436 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 PCDH8O95206 1070 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 GYPCP04921 128 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 C1QTNF9P0C862 333 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 FAM228BP0C875 321 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 PRLRP16471 622 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 ERCC2P18074 760 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 EPHA8P29322 1005 aaPredicted RBP12.31□□□□□ -0.44
CLDND1-223ENST00000511081 AKT2P31751 481 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 GKP32189 559 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 ABL2P42684 1182 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 CSNK1DP48730 415 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 TPI1P60174 286 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 ST3GAL2Q16842 350 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 BOLA3Q53S33 107 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 SEL1L3Q68CR1 1132 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 GDPD4Q6W3E5 623 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 CCNI2Q6ZMN8 369 aaPredicted RBP12.31□□□□□ -0.44
CLDND1-223ENST00000511081 LEKR1Q6ZMV7 388 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 GATAD2AQ86YP4 633 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
CLDND1-223ENST00000511081 PNPLA1Q8N8W4 532 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 TSC1Q92574 1164 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 KLK6Q92876 244 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 ZNF653Q96CK0 615 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 IFT43Q96FT9 208 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 KCTD15Q96SI1 283 aaPredicted RBP12.31□□□□□ -0.44
CLDND1-223ENST00000511081 KLF6Q99612 283 aaPredicted RBP12.31□□□□□ -0.44
CLDND1-223ENST00000511081 SLC39A8Q9C0K1 460 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 ZDHHC6Q9H6R6 413 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 KLHL11Q9NVR0 708 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 CWC15Q9P013 229 aaKnown RBP12.31□□□□□ -0.44
CLDND1-223ENST00000511081 IFNKQ9P0W0 207 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 LHX3Q9UBR4 397 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 CA5BQ9Y2D0 317 aa12.31□□□□□ -0.44
CLDND1-223ENST00000511081 GOLGA4Q13439 2230 aaKnown RBP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 TMEM8BA6NDV4 472 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 J3KR12 359 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 EEF2KO00418 725 aaKnown RBP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 KRIT1O00522 736 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 PAK4O96013 591 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 CYP1A2P05177 515 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 ITGAVP06756 1048 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 THEGLP0DJG4 465 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 TIMP2P16035 220 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 IL1R2P27930 398 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 SUOXP51687 545 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 RAD51Q06609 339 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 DPYSQ14117 519 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 PIGHQ14442 188 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 DPYSL2Q16555 572 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 ATXN7L2Q5T6C5 722 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-223ENST00000511081 GCNT7Q6ZNI0 430 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 RFX8Q6ZV50 586 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 SLC25A45Q8N413 288 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 LZTR1Q8N653 840 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 NIPA2Q8N8Q9 360 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 OR6K2Q8NGY2 324 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 CPLX3Q8WVH0 158 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 ARHGEF26Q96DR7 871 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 GDAP1L1Q96MZ0 367 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 KLHL32Q96NJ5 620 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 PCDHGA1Q9Y5H4 931 aa12.3□□□□□ -0.44
CLDND1-223ENST00000511081 ITPR1Q14643 2758 aa12.29□□□□□ -0.44
CLDND1-223ENST00000511081 TSPAN11A1L157 253 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms