RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 RBM41Q96IZ5 413 aaKnown RBP17.5■□□□□ 0.39
CLDND1-221ENST00000510541 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
CLDND1-221ENST00000510541 NUSAP1Q9BXS6 441 aaKnown RBP17.5■□□□□ 0.39
CLDND1-221ENST00000510541 DTLQ9NZJ0 730 aa17.5■□□□□ 0.39
CLDND1-221ENST00000510541 UPK3BL1B0FP48 263 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 UPK3BL2E5RIL1 263 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 DFFAO00273 331 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 KPNA3O00505 521 aaPredicted RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 AREL1O15033 823 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 BCAT2O15382 392 aaPredicted RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 KRT86O43790 486 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 SOCS5O75159 536 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 SYPP08247 313 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 ADRB3P13945 408 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 AFF3P51826 1226 aaKnown RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 PPIDQ08752 370 aaKnown RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 MARC1Q5VT66 337 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 KIAA1161Q6NSJ0 714 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 GDPD4Q6W3E5 623 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 KIAA1328Q86T90 577 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 ACRBPQ8NEB7 543 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 OR14C36Q8NHC7 312 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 GANCQ8TET4 914 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 PIGKQ92643 395 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 ARRDC3Q96B67 414 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 OLFM3Q96PB7 478 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 CINPQ9BW66 212 aaPredicted RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 MAK16Q9BXY0 300 aaKnown RBP17.49■□□□□ 0.39
CLDND1-221ENST00000510541 TM6SF2Q9BZW4 377 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 DLL3Q9NYJ7 618 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 ACTL7AQ9Y615 435 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 DUSP10Q9Y6W6 482 aa17.49■□□□□ 0.39
CLDND1-221ENST00000510541 PCDH15Q96QU1 1955 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 MEI4A8MW99 385 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 HTRA2O43464 458 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-221ENST00000510541 MFSD11O43934 449 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 ZNF883P0CG24 379 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 TGM2P21980 687 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 PEX5P50542 639 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 AGERQ15109 404 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 PDK1Q15118 436 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 SLC14A2Q15849 920 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 TMEM259Q4ZIN3 620 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 TRIM61Q5EBN2 209 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 IL27RAQ6UWB1 636 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 SRLQ86TD4 932 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 C12orf50Q8NA57 414 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-221ENST00000510541 ZNF830Q96NB3 372 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-221ENST00000510541 NUDCD1Q96RS6 583 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 SUV39H2Q9H5I1 410 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 ATP13A3Q9H7F0 1226 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 FADS3Q9Y5Q0 445 aa17.48■□□□□ 0.39
CLDND1-221ENST00000510541 LNP1A1A4G5 178 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 C16orf96A6NNT2 1141 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 TMEM110-MUSTN1A8MSY1 372 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 KRIT1O00522 736 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 APOL1O14791 398 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 DFNA5O60443 496 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 DNA2P51530 1060 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 METAP1P53582 386 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 POLR2LP62875 67 aaKnown RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 IFI35P80217 286 aaPredicted RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 SLC10A7Q0GE19 358 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 SLC10A2Q12908 348 aaPredicted RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 SLC14A1Q13336 389 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 ODF2Q5BJF6 829 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 FBXL19Q6PCT2 694 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 MFSD7Q6UXD7 560 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 SPOCD1Q6ZMY3 1216 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 PRPF39Q86UA1 669 aaKnown RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 NT5DC3Q86UY8 548 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 FAM124AQ86V42 546 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 HORMAD1Q86X24 394 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 TP53INP2Q8IXH6 220 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 RAVER1Q8IY67 606 aaKnown RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 TSEN2Q8NCE0 465 aaKnown RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 GRIN3AQ8TCU5 1115 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 SKA1Q96BD8 255 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 FEM1CQ96JP0 617 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 LENG8Q96PV6 779 aaPredicted RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 ZDHHC6Q9H6R6 413 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 DNAAF2Q9NVR5 837 aaKnown RBP17.47■□□□□ 0.39
CLDND1-221ENST00000510541 PPIL1Q9Y3C6 166 aa17.47■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3DA0A087WVF3 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3IA0A087WXS9 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3EA0A087X179 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3KA0A087X1G2 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 GRID2IPA4D2P6 1211 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3FA6NER0 549 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3LB9A6J9 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TRAFD1O14545 582 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 ARHGAP33O14559 1287 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TOR1BO14657 336 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 SLC30A4O14863 429 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 PPP1R12AO14974 1030 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 VILLO15195 856 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 MTSS1O43312 755 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 BNIP3LO60238 219 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms