RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 IHHQ14623 411 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 PUM1Q14671 1186 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 PAFAH1B3Q15102 231 aaKnown RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 KIF19Q2TAC6 998 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TMEM259Q4ZIN3 620 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3GQ6DHY5 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3CQ6IPX1 549 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 KDM7AQ6ZMT4 941 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TRIM69Q86WT6 500 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TMTC1Q8IUR5 882 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TBC1D3Q8IZP1 549 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 RYBPQ8N488 228 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 MINDY1Q8N5J2 469 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 LZTR1Q8N653 840 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 KLK6Q92876 244 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 GTPBP2Q9BX10 602 aaKnown RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 KDM4CQ9H3R0 1056 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 TMEM9BQ9NQ34 198 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 SUSD2Q9UGT4 822 aa18.42■□□□□ 0.54
CLDND1-220ENST00000508902 FARP1Q9Y4F1 1045 aaPredicted RBP18.42■□□□□ 0.54
CLDND1-220ENST00000508902 A0A1W2PQU0 124 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 RNGTTO60942 597 aaKnown RBP18.41■□□□□ 0.54
CLDND1-220ENST00000508902 POP4O95707 220 aaKnown RBP18.41■□□□□ 0.54
CLDND1-220ENST00000508902 IGSF6O95976 241 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 PRLRP16471 622 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 NEK3P51956 506 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 ZNF284Q2VY69 593 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 ZNF805Q5CZA5 627 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 PLD5Q8N7P1 536 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 RTKNQ9BST9 563 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 CALN1Q9BXU9 219 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 SP110Q9HB58 689 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 PREBQ9HCU5 417 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 FNDC3AQ9Y2H6 1198 aaKnown RBP18.41■□□□□ 0.54
CLDND1-220ENST00000508902 SNX11Q9Y5W9 270 aa18.41■□□□□ 0.54
CLDND1-220ENST00000508902 A0A0A6YYK5 440 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-220ENST00000508902 TSPAN11A1L157 253 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 AREL1O15033 823 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 KRT7P08729 469 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 TIMP2P16035 220 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 CR2P20023 1033 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 CYLC1P35663 651 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-220ENST00000508902 GALNT2Q10471 571 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 SFSWAPQ12872 951 aaKnown RBP18.4■□□□□ 0.54
CLDND1-220ENST00000508902 PDK2Q15119 407 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 GDPD4Q6W3E5 623 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 TPCN2Q8NHX9 752 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 RNF157Q96PX1 679 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 BAG1Q99933 345 aaPredicted RBP18.4■□□□□ 0.54
CLDND1-220ENST00000508902 DESI2Q9BSY9 194 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 FZD3Q9NPG1 666 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 DONSONQ9NYP3 566 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 TRIM10Q9UDY6 481 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 LCMT1Q9UIC8 334 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 ALG6Q9Y672 507 aa18.4■□□□□ 0.54
CLDND1-220ENST00000508902 ARID1BQ8NFD5 2236 aaPredicted RBP18.39■□□□□ 0.54
CLDND1-220ENST00000508902 LRRD1A4D1F6 860 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 KCNK3O14649 394 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 GIPC1O14908 333 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 RAD51BO15315 384 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 PALMO75781 387 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 PRKCGP05129 697 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 CD59P13987 128 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 GNSP15586 552 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 CTSKP43235 329 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 GRIA4P48058 902 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 AFF3P51826 1226 aaKnown RBP18.39■□□□□ 0.53
CLDND1-220ENST00000508902 ADCY2Q08462 1091 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 LBRQ14739 615 aaKnown RBP18.39■□□□□ 0.53
CLDND1-220ENST00000508902 TAZQ16635 292 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 TMCO4Q5TGY1 634 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 LRRC38Q5VT99 294 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 RABEPKQ7Z6M1 372 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 HORMAD1Q86X24 394 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 CAMK1DQ8IU85 385 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 TMEM145Q8NBT3 493 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 KRT35Q92764 455 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 LRIG1Q96JA1 1093 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 PSKH2Q96QS6 385 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 MYOCQ99972 504 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 HERPUD2Q9BSE4 406 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 CPEB1Q9BZB8 566 aaKnown RBP18.39■□□□□ 0.53
CLDND1-220ENST00000508902 DNAAF2Q9NVR5 837 aaKnown RBP18.39■□□□□ 0.53
CLDND1-220ENST00000508902 DTLQ9NZJ0 730 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 IMPACTQ9P2X3 320 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 ANKRD6Q9Y2G4 727 aa18.39■□□□□ 0.53
CLDND1-220ENST00000508902 MED19A0JLT2 244 aaPredicted RBP18.38■□□□□ 0.53
CLDND1-220ENST00000508902 H0Y8X5 98 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 AP1G1O43747 822 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 KRT1P04264 644 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 TNNT1P13805 278 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 GARSP41250 739 aaKnown RBP18.38■□□□□ 0.53
CLDND1-220ENST00000508902 MAXP61244 160 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 RACK1P63244 317 aaKnown RBP18.38■□□□□ 0.53
CLDND1-220ENST00000508902 SHBQ15464 509 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 UAP1L1Q3KQV9 507 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 SLC9A4Q6AI14 798 aa18.38■□□□□ 0.53
CLDND1-220ENST00000508902 NPNTQ6UXI9 565 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms