RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 TTC36A6NLP5 189 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 INAFM1C9JVW0 142 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 CHL1O00533 1208 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 HOXC6P09630 235 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 FOXG1P55316 489 aaPredicted RBP5.39□□□□□ -1.55
GYPA-205ENST00000508337 EFNB1P98172 346 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 TRAF2Q12933 501 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 ITGADQ13349 1161 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 ARHGEF6Q15052 776 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 PWP2Q15269 919 aaKnown RBP5.39□□□□□ -1.55
GYPA-205ENST00000508337 MOB3CQ70IA8 216 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 TADA2BQ86TJ2 420 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 GPAT4Q86UL3 456 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 LSM14AQ8ND56 463 aaKnown RBP5.39□□□□□ -1.55
GYPA-205ENST00000508337 OR4N2Q8NGD1 307 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 TMEM163Q8TC26 289 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 MIB2Q96AX9 1013 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 HVCN1Q96D96 273 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 BBS4Q96RK4 519 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 SIN3AQ96ST3 1273 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 WNT16Q9UBV4 365 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 PCDHA7Q9UN72 937 aa5.39□□□□□ -1.55
GYPA-205ENST00000508337 GOLGA6L10A0A0M3HER8 536 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.38□□□□□ -1.55
GYPA-205ENST00000508337 PABPN1LA6NDY0 278 aaKnown RBP5.38□□□□□ -1.55
GYPA-205ENST00000508337 FAM90A7PA6NKC0 464 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 FAM90A22PA8MWA6 464 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 FAM90A12PA8MX19 464 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 FAM90A23PA8MXZ1 464 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 TNPO2O14787 897 aaKnown RBP5.38□□□□□ -1.55
GYPA-205ENST00000508337 SERPINI2O75830 405 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 NGFRP08138 427 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 MYF6P23409 242 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 FMO4P31512 558 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 ARRB2P32121 409 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 RPL3P39023 403 aaKnown RBP5.38□□□□□ -1.55
GYPA-205ENST00000508337 PMS2P54278 862 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 KRTAP10-11P60412 298 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 EGR4Q05215 589 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 SLC18A2Q05940 514 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 GALNT2Q10471 571 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 PLCB4Q15147 1175 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 TAF11Q15544 211 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 ZNF284Q2VY69 593 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 FAM83HQ6ZRV2 1179 aaPredicted RBP5.38□□□□□ -1.55
GYPA-205ENST00000508337 TBC1D26Q86UD7 250 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 CCDC105Q8IYK2 499 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 TMEM170AQ8WVE7 144 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 YME1L1Q96TA2 773 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 MVB12BQ9H7P6 319 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 SNTG1Q9NSN8 517 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 TMEM51Q9NW97 253 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
GYPA-205ENST00000508337 CTNNAL1Q9UBT7 734 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 SLC13A4Q9UKG4 626 aa5.38□□□□□ -1.55
GYPA-205ENST00000508337 TTC3P53804 2025 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 I6L893 689 aaPredicted RBP5.37□□□□□ -1.55
GYPA-205ENST00000508337 LDB2O43679 373 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 LCATP04180 440 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 PYGLP06737 847 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 PTPN2P17706 415 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
GYPA-205ENST00000508337 GGT5P36269 586 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 THPOP40225 353 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 THBS3P49746 956 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 CCR5P51681 352 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 FAM27E3Q08E93 113 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 TRAF1Q13077 416 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 PKP1Q13835 747 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 PLEKHO1Q53GL0 409 aaPredicted RBP5.37□□□□□ -1.55
GYPA-205ENST00000508337 SERTAD4-AS1Q5TG53 156 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 KIAA1161Q6NSJ0 714 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 KLHL24Q6TFL4 600 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 ZNF517Q6ZMY9 492 aaPredicted RBP5.37□□□□□ -1.55
GYPA-205ENST00000508337 NEK10Q6ZWH5 1172 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 MB21D2Q8IYB1 491 aaPredicted RBP5.37□□□□□ -1.55
GYPA-205ENST00000508337 KIAA2013Q8IYS2 634 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 RBFAQ8N0V3 343 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 TCP11L2Q8N4U5 519 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 ESX1Q8N693 406 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 IQCF1Q8N6M8 205 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 PRR26Q8N8Z3 221 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 C11orf65Q8NCR3 313 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 MED30Q96HR3 178 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 MARK4Q96L34 752 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 TTYH1Q9H313 450 aaPredicted RBP5.37□□□□□ -1.55
GYPA-205ENST00000508337 SAGE1Q9NXZ1 904 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 CARD8Q9Y2G2 431 aa5.37□□□□□ -1.55
GYPA-205ENST00000508337 EBAG9O00559 213 aa5.36□□□□□ -1.55
GYPA-205ENST00000508337 HOXC11O43248 304 aaPredicted RBP5.36□□□□□ -1.55
GYPA-205ENST00000508337 CREB3O43889 395 aa5.36□□□□□ -1.55
GYPA-205ENST00000508337 KCNJ13O60928 360 aa5.36□□□□□ -1.55
GYPA-205ENST00000508337 ACAA1P09110 424 aaPredicted RBP5.36□□□□□ -1.55
GYPA-205ENST00000508337 IRF1P10914 325 aa5.36□□□□□ -1.55
GYPA-205ENST00000508337 ARL1P40616 181 aaPredicted RBP5.36□□□□□ -1.55
GYPA-205ENST00000508337 CENPAP49450 140 aa5.36□□□□□ -1.55
GYPA-205ENST00000508337 CRYZQ08257 329 aaKnown RBP5.36□□□□□ -1.55
GYPA-205ENST00000508337 NEXNQ0ZGT2 675 aa5.36□□□□□ -1.55
GYPA-205ENST00000508337 CAMK1Q14012 370 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms