RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ATP11AP98196 1134 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 MAMLD1Q13495 774 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 C2CD6Q53TS8 623 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 RNF219Q5W0B1 726 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 IQCHQ86VS3 1027 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 FAM131BQ86XD5 332 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 PSTKQ8IV42 348 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 CCAR2Q8N163 923 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 EMC1Q8N766 993 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 JOSD2Q8TAC2 188 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 FAM172AQ8WUF8 416 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF653Q96CK0 615 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 MCEEQ96PE7 176 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 TRIM5Q9C035 493 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 FAM117AQ9C073 453 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 DEF6Q9H4E7 631 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 STIM2Q9P246 746 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 CNOT8Q9UFF9 292 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 XPO7Q9UIA9 1087 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 VANGL2Q9ULK5 521 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 TBC1D30Q9Y2I9 924 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 ENTPD2Q9Y5L3 495 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 TARSL2A2RTX5 802 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 LRRC72A6NJI9 287 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 NOBOXO60393 691 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 MFAP3LO75121 409 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 RNASEH2AO75792 299 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 RNF8O76064 485 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 ADCY5O95622 1261 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 GP1BAP07359 652 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 PSMA2P25787 234 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 CTSOP43234 321 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 MAPKAPK2P49137 400 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 HDAC4P56524 1084 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 KRT83P78385 493 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 TLE1Q04724 770 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 CDO1Q16878 200 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 PITRM1Q5JRX3 1037 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 TRNP1Q6NT89 227 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 ALKBH5Q6P6C2 394 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 CCDC81Q6ZN84 652 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 TMC6Q7Z403 805 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 SLFN11Q7Z7L1 901 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 MMAAQ8IVH4 418 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 TMEM145Q8NBT3 493 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 CPLX3Q8WVH0 158 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 EXTL1Q92935 676 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 SKA1Q96BD8 255 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 MRFAP1L1Q96HT8 127 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 APOLD1Q96LR9 279 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 PSMG3-AS1Q96PY0 264 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 EPAS1Q99814 870 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 ZYG11BQ9C0D3 744 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 SIK2Q9H0K1 926 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 ATXN7L1Q9ULK2 861 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 PCDHGA8Q9Y5G5 932 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 HEMK1Q9Y5R4 338 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 CENPEQ02224 2701 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 LRP4O75096 1905 aa9.39□□□□□ -0.91
UBE2D3-223ENST00000508249 LRRK1Q38SD2 2015 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 ILVBLA1L0T0 632 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 TMCO5BA8MYB1 307 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 TTC34A8MYJ7 566 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 AKR1B15C9JRZ8 316 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 FFAR2O15552 330 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 CCP110O43303 1012 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 PIAS2O75928 621 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 RHOCP08134 193 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 SKILP12757 684 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 VAV1P15498 845 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 RHOQP17081 205 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 GOT1P17174 413 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 TFE3P19532 575 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 WT1P19544 449 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 L1CAMP32004 1257 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 SLC8A1P32418 973 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 PCK1P35558 622 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 CSKP41240 450 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 PSMD8P48556 350 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 CLCN6P51797 869 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 ECT2LQ008S8 904 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 SLC20A2Q08357 652 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 PIGHQ14442 188 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 SLC18A3Q16572 532 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 C15orf59Q2T9L4 293 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 MANEALQ5VSG8 457 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 AGBL4Q5VU57 503 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 HIST2H2BCQ6DN03 193 aa9.38□□□□□ -0.91
UBE2D3-223ENST00000508249 CXorf57Q6NSI4 855 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms