RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	LRRC4	Q9HBW1	653 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	OLA1	Q9NTK5	396 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	RAB20	Q9NX57	234 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	TJP2	Q9UDY2	1190 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	FTSJ1	Q9UET6	329 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	ADAMTS1	Q9UHI8	967 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	STOML2	Q9UJZ1	356 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	RCOR1	Q9UKL0	485 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	INTS6	Q9UL03	887 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PCDHGB2	Q9Y5G2	931 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	GCN1	Q92616	2671 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	SMG1	Q96Q15	3661 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	OR14I1	A6ND48	311 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	TRIM49B	A6NDI0	452 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	MID1	O15344	667 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	TNFSF14	O43557	240 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	TLX3	O43711	291 aa	Predicted RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PCDHGA12	O60330	932 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	MYL1	P05976	194 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	HSP90AA1	P07900	732 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	DLD	P09622	509 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	VAV1	P15498	845 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CMA1	P23946	247 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CD27	P26842	260 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CSK	P41240	450 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	GRK6	P43250	576 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	SYK	P43405	635 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PSMD8	P48556	350 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	HARS2	P49590	506 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	STK19	P49842	368 aa	Predicted RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	METAP1	P53582	386 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PMS1	P54277	932 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PPP2CB	P62714	309 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	RPS24	P62847	133 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PPP2CA	P67775	309 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	LRMP	Q12912	555 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ADAM9	Q13443	819 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PNOC	Q13519	176 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CUL2	Q13617	745 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	KCNJ12	Q14500	433 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	SMAD1	Q15797	465 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	TTC31	Q49AM3	519 aa	Predicted RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	FSCB	Q5H9T9	825 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ADGRF1	Q5T601	910 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PIK3R6	Q5UE93	754 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ZNF776	Q68DI1	518 aa	Predicted RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	KIAA0895L	Q68EN5	471 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	MSANTD2	Q6P1R3	559 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	NCEH1	Q6PIU2	408 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	KRBA2	Q6ZNG9	492 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ADAT2	Q7Z6V5	191 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	NOP9	Q86U38	636 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	RELL1	Q8IUW5	271 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	MFN1	Q8IWA4	741 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	HSCB	Q8IWL3	235 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	SIX6OS1	Q8N1H7	587 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CFAP52	Q8N1V2	620 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	AADAT	Q8N5Z0	425 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ANKS4B	Q8N8V4	417 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	RNF139	Q8WU17	664 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ERCC4	Q92889	916 aa	Predicted RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	KAT5	Q92993	513 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	SNX21	Q969T3	373 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	IPO9	Q96P70	1041 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	SPON2	Q9BUD6	331 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	UBXN6	Q9BZV1	441 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PABPC3	Q9H361	631 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CAAP1	Q9H8G2	361 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	DKK4	Q9UBT3	224 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	XPO7	Q9UIA9	1087 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	CFAP45	Q9UL16	551 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	PLA2G4C	Q9UP65	541 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	ZDHHC9	Q9Y397	364 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	HBS1L	Q9Y450	684 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	LRP4	O75096	1905 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	TDRD6	O60522	2096 aa	Known RBP	5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965	DOCK4	Q8N1I0	1966 aa		5.73	□□□□□ -1.49
ATXN3-210	ENST00000507965		A0A087WV48	116 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	FAM237A	A0A1B0GTK4	181 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965		A0A1B0GTQ1	180 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965		A0A1W2PPC4	97 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	TTC34	A8MYJ7	566 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	C10orf142	B7Z368	130 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965		M0QYV0	167 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	VILL	O15195	856 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	PAPSS1	O43252	624 aa	Predicted RBP	5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	TIMM44	O43615	452 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	ACSL4	O60488	711 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	RNASEH2A	O75792	299 aa	Known RBP	5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	C1QL1	O75973	258 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	LATS1	O95835	1130 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	MOCS2	O96007	188 aa	Predicted RBP	5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	LTF	P02788	710 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	FYN	P06241	537 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	SETSIP	P0DME0	302 aa		5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	EPB41	P11171	864 aa	Known RBP	5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	POLR2E	P19388	210 aa	Known RBP	5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	RPL13	P26373	211 aa	Known RBP	5.72	□□□□□ -1.49
ATXN3-210	ENST00000507965	ITPKB	P27987	946 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms