RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SMIM28A0A1B0GU29 152 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TARSL2A2RTX5 802 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 BUB1O43683 1085 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 RTN2O75298 545 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF205O95201 554 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 LSM8O95777 96 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 MYBL1P10243 752 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 MCM3P25205 808 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CD52P31358 61 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 SERPINF1P36955 418 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 HADHBP55084 474 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 OSTNP61366 133 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TNNC1P63316 161 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CTAG1AP78358 180 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TLE2Q04725 743 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 RFX8Q6ZV50 586 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 CHSY3Q70JA7 882 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 BEND5Q7L4P6 421 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TAOK1Q7L7X3 1001 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF572Q7Z3I7 529 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF571Q7Z3V5 609 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ECHDC2Q86YB7 292 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 UTP15Q8TED0 518 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 HPDLQ96IR7 371 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 UBXN6Q9BZV1 441 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TRPV6Q9H1D0 765 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ISCUQ9H1K1 167 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 AGO3Q9H9G7 860 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 ZC3H7BQ9UGR2 993 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 NOCTQ9UK39 431 aaKnown RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 AJAP1Q9UKB5 411 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-206ENST00000507875 USP18Q9UMW8 372 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 AGAP1Q9UPQ3 857 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 HYOU1Q9Y4L1 999 aa7.3□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM82A0PJX8 343 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PRAMEF25A6NGN4 478 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TBKBP1A7MCY6 615 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 C22orf46C9J442 243 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 BUB1BO60566 1050 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CSDE1O75534 798 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 DGKIO75912 1065 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ITGB3P05106 788 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 THP07101 528 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 H2AFZP0C0S5 128 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 GHRP10912 638 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CYP11B1P15538 503 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TAF6P49848 677 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PAPOLAP51003 745 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 RPS16P62249 146 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TEKQ02763 1124 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 SPARCL1Q14515 664 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 SGO2Q562F6 1265 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 SPDYCQ5MJ68 293 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 HHATQ5VTY9 493 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 C9orf57Q5W0N0 161 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 GJB7Q6PEY0 223 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CRTC1Q6UUV9 634 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 H2AFVQ71UI9 128 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 LIMS2Q7Z4I7 341 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM86AQ8N2M4 240 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 STT3BQ8TCJ2 826 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 URGCPQ8TCY9 931 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF606Q8WXB4 792 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 HEXIM2Q96MH2 286 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TLR10Q9BXR5 811 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 MIS12Q9H081 205 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 DUSP15Q9H1R2 295 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 NXF3Q9H4D5 531 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 APOBEC3GQ9HC16 384 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM161AQ9NX61 479 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PRSS50Q9UI38 385 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PCDHB4Q9Y5E5 795 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 DNAH12Q6ZR08 3092 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 C17orf113A0A1B0GUU1 675 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM189-UBE2V1I3L0A0 370 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CLASP2O75122 1294 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PALMO75781 387 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 C21orf58P58505 322 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PRAMEF9Q5VWM5 478 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 FDX2Q6P4F2 183 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ALKBH5Q6P6C2 394 aaKnown RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CDR2LQ86X02 465 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CILP2Q8IUL8 1156 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 RHOT2Q8IXI1 618 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PEX5LQ8IYB4 626 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ADGRG2Q8IZP9 1017 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 GALNT15Q8N3T1 639 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF655Q8N720 491 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-206ENST00000507875 MAML1Q92585 1016 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 LRRC46Q96FV0 321 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ADAM2Q99965 735 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 PACSIN1Q9BY11 444 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 LHX5Q9H2C1 402 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 CYP4F11Q9HBI6 524 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms