RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CAPN14A8MX76 684 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 F7P08709 466 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ARRB2P32121 409 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 SLC1A2P43004 574 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ABCG1P45844 678 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 SLC11A2P49281 568 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 MAXP61244 160 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 MFSD6LQ8IWD5 586 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 DENND6AQ8IWF6 608 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 SLC39A11Q8N1S5 342 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 FEM1CQ96JP0 617 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ARL8BQ9NVJ2 186 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 SLC39A10Q9ULF5 831 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 PCDHB12Q9Y5F1 795 aa17.85■□□□□ 0.45
SFXN1-208ENST00000507823 ANAPC1Q9H1A4 1944 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 TMEM114B3SHH9 223 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 TARM1B6A8C7 271 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 COCHO43405 550 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 GJB5O95377 273 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 PRKAA2P54646 552 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 AQP5P55064 265 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 ABCE1P61221 599 aaKnown RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 ACVR1Q04771 509 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 TUBB3Q13509 450 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 SLC12A1Q13621 1099 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 CALML6Q8TD86 181 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 TOP1MTQ969P6 601 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 NSL1Q96IY1 281 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 POLR1EQ9GZS1 481 aaKnown RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 ATXN3LQ9H3M9 355 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 FBXO5Q9UKT4 447 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 RPL26L1Q9UNX3 145 aaKnown RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 C2orf71A6NGG8 1288 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 SBK3P0C264 359 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 CRABP2P29373 138 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 PPP3CCP48454 512 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 CD151P48509 253 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 MPP1Q00013 466 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 ZBTB16Q05516 673 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 THOC5Q13769 683 aaKnown RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 USP10Q14694 798 aaKnown RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 PCSK7Q16549 785 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 NEPROQ6NW34 567 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 CHST9Q7L1S5 443 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 WDR75Q8IWA0 830 aaKnown RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 OR13J1Q8NGT2 312 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 PRR11Q96HE9 360 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-208ENST00000507823 NMUR2Q9GZQ4 415 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 RIMKLBQ9ULI2 386 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 SORCS3Q9UPU3 1222 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 DNAJC16Q9Y2G8 782 aa17.84■□□□□ 0.45
SFXN1-208ENST00000507823 CCDC78A2IDD5 438 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 ZNF195O14628 629 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 SLC7A4O43246 635 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 WFS1O76024 890 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 CALB2P22676 271 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 LEPRP48357 1165 aaKnown RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 RAB10P61026 200 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 ILF2Q12905 390 aaKnown RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 SIRPB2Q5JXA9 342 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 ZYG11AQ6WRX3 759 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 LMNTD2Q8IXW0 634 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 CENPLQ8N0S6 344 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 ZNF512Q96ME7 567 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 GPR78Q96P69 363 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 MGME1Q9BQP7 344 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 TBC1D10AQ9BXI6 508 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 OXSMQ9NWU1 459 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 UXTQ9UBK9 157 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 STOML2Q9UJZ1 356 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 TLK1Q9UKI8 766 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 MUSKO15146 869 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 CCDC22O60826 627 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 LYPLA1O75608 230 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 STC2O76061 302 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 UPP2O95045 317 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 GNA12Q03113 381 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 CTBP1Q13363 440 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 RAB33AQ14088 237 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 TBCCQ15814 346 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 RABGAP1LQ5R372 815 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 ALYREFQ86V81 257 aaKnown RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 SLC25A41Q8N5S1 370 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 STYXQ8WUJ0 223 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 PRICKLE1Q96MT3 831 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-208ENST00000507823 NOD2Q9HC29 1040 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 DNAJC28Q9NX36 388 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 TRPM5Q9NZQ8 1165 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 YIPF1Q9Y548 306 aa17.83■□□□□ 0.44
SFXN1-208ENST00000507823 FAM95CA0A1B0GW59 222 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 CARNS1A5YM72 827 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 CHUKO15111 745 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 CLDN11O75508 207 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 KLKB1P03952 638 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 SERPINA6P08185 405 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 HLA-DPA1P20036 260 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 POU4F1Q01851 419 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 ITKQ08881 620 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 ITGA9Q13797 1035 aa17.82■□□□□ 0.44
SFXN1-208ENST00000507823 KIAA1841Q6NSI8 718 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms