RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 DDX50Q9BQ39 737 aaKnown RBP13.12□□□□□ -0.31
SPDL1-206ENST00000507232 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 DSEQ9UL01 958 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 SORCS3Q9UPU3 1222 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 KCTD3Q9Y597 815 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 CFLARO15519 480 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 LINGO3P0C6S8 592 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 TFEBP19484 476 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 PIK3R1P27986 724 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 BRMS1LQ5PSV4 323 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 RTL3Q8N8U3 475 aaKnown RBP13.12□□□□□ -0.31
SPDL1-206ENST00000507232 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
SPDL1-206ENST00000507232 PSMG2Q969U7 264 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 FAM136AQ96C01 138 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 OLFM1Q99784 485 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 DRC3Q9H069 523 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
SPDL1-206ENST00000507232 KCNU1A8MYU2 1149 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 MATN2O00339 956 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 FGF10O15520 208 aaPredicted RBP13.11□□□□□ -0.31
SPDL1-206ENST00000507232 PSMD3O43242 534 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 CAPN15O75808 1086 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 ATP5BP06576 529 aaKnown RBP13.11□□□□□ -0.31
SPDL1-206ENST00000507232 SKIP12755 728 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 TSPAN8P19075 237 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 GLDCP23378 1020 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 GCKP35557 465 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 PSEN1P49768 467 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 RAB27AP51159 221 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 KLC1Q07866 573 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 FRG1Q14331 258 aaKnown RBP13.11□□□□□ -0.31
SPDL1-206ENST00000507232 FSCBQ5H9T9 825 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 CLLU1OSQ5K130 101 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
SPDL1-206ENST00000507232 KLHDC9Q8NEP7 349 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 STYXQ8WUJ0 223 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 GPR78Q96P69 363 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 ZNF184Q99676 751 aaPredicted RBP13.11□□□□□ -0.31
SPDL1-206ENST00000507232 YIPF3Q9GZM5 350 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 POMKQ9H5K3 350 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 ADAMTS6Q9UKP5 1117 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 FBXO5Q9UKT4 447 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 ACTL7AQ9Y615 435 aa13.11□□□□□ -0.31
SPDL1-206ENST00000507232 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 SEPT4O43236 478 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 MT-CO1P00395 513 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PIRTP0C851 137 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 KCNA5P22460 613 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 CD151P48509 253 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 CSRP3P50461 194 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 SLC12A2P55011 1212 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PKNOX1P55347 436 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 TBX4P57082 545 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 MAPRE1Q15691 268 aaKnown RBP13.1□□□□□ -0.31
SPDL1-206ENST00000507232 SH2D4BQ5SQS7 431 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 NEPROQ6NW34 567 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
SPDL1-206ENST00000507232 IGSF8Q969P0 613 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 RCN3Q96D15 328 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PHF21BQ96EK2 531 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ANKRD27Q96NW4 1050 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 SLC24A3Q9HC58 644 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 POMPQ9Y244 141 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ANKRD6Q9Y2G4 727 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 A6NHS1 94 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 HDAC3O15379 428 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 CABYRO75952 493 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 SLC4A1P02730 911 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ZCCHC18P0CG32 403 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SPDL1-206ENST00000507232 HOXC13P31276 330 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 CYP2C18P33260 490 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PBX3P40426 434 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PEX19P40855 299 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 GATMP50440 423 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ZNF135P52742 658 aaPredicted RBP13.1□□□□□ -0.31
SPDL1-206ENST00000507232 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ASPHQ12797 758 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 MS4A13Q5J8X5 152 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 RANBP10Q6VN20 620 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 OR6P1Q8NGX9 317 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 ACTRT2Q8TDY3 377 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 EXT2Q93063 718 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 TREX1Q9NSU2 369 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 LRCH1Q9Y2L9 728 aa13.1□□□□□ -0.31
SPDL1-206ENST00000507232 TARM1B6A8C7 271 aa13.09□□□□□ -0.31
SPDL1-206ENST00000507232 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
SPDL1-206ENST00000507232 PEX11BO96011 259 aa13.09□□□□□ -0.31
SPDL1-206ENST00000507232 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms