RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 KLHL10Q6JEL2 608 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 ESRP1Q6NXG1 681 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 NEK5Q6P3R8 708 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 LEKR1Q6ZMV7 388 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 PARS2Q7L3T8 475 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 RAB11FIP2Q7L804 512 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 RD3Q7Z3Z2 195 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 VPS36Q86VN1 386 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 ZFAND4Q86XD8 727 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 CREBRFQ8IUR6 639 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 PHACTR4Q8IZ21 702 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 SDR16C5Q8N3Y7 309 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 TMIEQ8NEW7 156 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 TPCN2Q8NHX9 752 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 FAM174AQ8TBP5 190 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 SNRNP27Q8WVK2 155 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 BTN2A2Q8WVV5 523 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 CCDC74AQ96AQ1 378 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 SGF29Q96ES7 293 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 IFT43Q96FT9 208 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 MED15Q96RN5 788 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 GFM1Q96RP9 751 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 PSMB7Q99436 277 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 CPEB1Q9BZB8 566 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 SLC13A1Q9BZW2 595 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 INTS2Q9H0H0 1204 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 SYNCQ9H7C4 482 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 GDPD2Q9HCC8 539 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 METTL14Q9HCE5 456 aaKnown RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 UBE2TQ9NPD8 197 aaPredicted RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 TMPRSS4Q9NRS4 437 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 RMND1Q9NWS8 449 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 MPP6Q9NZW5 540 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 SPASTQ9UBP0 616 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 GGT7Q9UJ14 662 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 SALL4Q9UJQ4 1053 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 ATXN7L1Q9ULK2 861 aaPredicted RBP5.87□□□□□ -1.47
GYPB-208ENST00000507009 PADI4Q9UM07 663 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 OR51B4Q9Y5P0 310 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 ACTL7AQ9Y615 435 aa5.87□□□□□ -1.47
GYPB-208ENST00000507009 RP1P56715 2156 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 KRIT1O00522 736 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 YY2O15391 372 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TCEA3O75764 348 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ITGA2BP08514 1039 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 CTSEP14091 401 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TIMP2P16035 220 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TSHRP16473 764 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TFE3P19532 575 aaPredicted RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 OR1E1P30953 314 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 L1CAMP32004 1257 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 NOS2P35228 1153 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 IGFALSP35858 605 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 GMPRP36959 345 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ABL2P42684 1182 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 SULT1E1P49888 294 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 CCNHP51946 323 aaPredicted RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 PDX1P52945 283 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 INHBCP55103 352 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 CDH4P55283 916 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TLE1Q04724 770 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
GYPB-208ENST00000507009 PDCLQ13371 301 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TBR1Q16650 682 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 PHF19Q5T6S3 580 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ZNF658Q5TYW1 1059 aaPredicted RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 KIAA1161Q6NSJ0 714 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 MRPL14Q6P1L8 145 aaKnown RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 GJB7Q6PEY0 223 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 IGF2-ASQ6U949 168 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 LRRC31Q6UY01 552 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ZNF574Q6ZN55 896 aaPredicted RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 FAM183BPQ6ZVS7 135 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 CLEC14AQ86T13 490 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ZNF354CQ86Y25 554 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 HID1Q8IV36 788 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 DRC7Q8IY82 874 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ZSCAN1Q8NBB4 408 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 KYQ8NBH2 561 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ZNF606Q8WXB4 792 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 NAT6Q93015 286 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TSACCQ96A04 125 aaPredicted RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 CCDC34Q96HJ3 373 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 KREMEN1Q96MU8 473 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 CPXM1Q96SM3 734 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 HEPHQ9BQS7 1158 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 WRAP53Q9BUR4 548 aaKnown RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 LRRC61Q9BV99 259 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 HDAC8Q9BY41 377 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 STRADBQ9C0K7 418 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 TKTL2Q9H0I9 626 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 WDCPQ9H6R7 721 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 SUDS3Q9H7L9 328 aaPredicted RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 ATP13A1Q9HD20 1204 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 PLCB1Q9NQ66 1216 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 PIGVQ9NUD9 493 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 SEPT10Q9P0V9 454 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 SEPT3Q9UH03 358 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 HS3ST2Q9Y278 367 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 LOXL2Q9Y4K0 774 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms