RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 BCL7BQ9BQE9 202 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 RHOBTB2Q9BYZ6 727 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 PCDHAC1Q9H158 963 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 PARVBQ9HBI1 364 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 AGPAT4Q9NRZ5 378 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 SLC17A6Q9P2U8 582 aa16.07■□□□□ 0.16
SCLT1-208ENST00000506368 KCNU1A8MYU2 1149 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 H0YAE9 185 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 AP3B1O00203 1094 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 CLOCKO15516 846 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 CILPO75339 1184 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 LTFP02788 710 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 GPIP06744 558 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 SNRPB2P08579 225 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 ERVK-10P10266 1014 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 PABPC1P11940 636 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 PSMA4P25789 261 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 ATICP31939 592 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 GLUD2P49448 558 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 NEK2P51955 445 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 KPNA2P52292 529 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 TRAF2Q12933 501 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 C15orf59Q2T9L4 293 aaPredicted RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 HSDL1Q3SXM5 330 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 ZNF773Q6PK81 442 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 SLC2A7Q6PXP3 512 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 CCDC60Q8IWA6 550 aaPredicted RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 CBR4Q8N4T8 237 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 DHRSXQ8N5I4 330 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 HOPXQ9BPY8 73 aaPredicted RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 NIFKQ9BYG3 293 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 SLC38A10Q9HBR0 1119 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 GBA2Q9HCG7 927 aaPredicted RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 SYBUQ9NX95 663 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 DLGAP1O14490 977 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 SDHDO14521 159 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 IL18RAPO95256 599 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 OXSR1O95747 527 aaPredicted RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 NTRK1P04629 796 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 HOXC6P09630 235 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 MBL2P11226 248 aaPredicted RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 DNAJB2P25686 324 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 PTPN9P43378 593 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 TFAMQ00059 246 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 ITGADQ13349 1161 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 CDO1Q16878 200 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 TBCELQ5QJ74 424 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 SH3PXD2AQ5TCZ1 1133 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 FAM183BPQ6ZVS7 135 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 AGR3Q8TD06 166 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 CTRCQ99895 268 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 TASP1Q9H6P5 420 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 NGRNQ9NPE2 291 aaKnown RBP16.06■□□□□ 0.16
SCLT1-208ENST00000506368 DAPK2Q9UIK4 370 aa16.06■□□□□ 0.16
SCLT1-208ENST00000506368 RNF103-CHMP3A0A140T963 221 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 ERI2A8K979 691 aaKnown RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 TIPRLO75663 272 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 CD1EP15812 388 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 IREB2P48200 963 aaKnown RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 PCYT1AP49585 367 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 DNAJB13P59910 316 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 ACTR2P61160 394 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 GBE1Q04446 702 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 SLC12A1Q13621 1099 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 FASTKQ14296 549 aaKnown RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 CYP2A13Q16696 494 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 PPP6R3Q5H9R7 873 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 TMEM198Q66K66 360 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 LRRC8EQ6NSJ5 796 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 TRNP1Q6NT89 227 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 IGFN1Q86VF2 1251 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 SFRP1Q8N474 314 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 PCDH20Q8N6Y1 951 aaKnown RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 KDM1BQ8NB78 822 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 ZMAT2Q96NC0 199 aaKnown RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 MCMBPQ9BTE3 642 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 RAD21L1Q9H4I0 556 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 SMPD3Q9NY59 655 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 BFARQ9NZS9 450 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 MTF2Q9Y483 593 aaPredicted RBP16.05■□□□□ 0.16
SCLT1-208ENST00000506368 RAD54BQ9Y620 910 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
SCLT1-208ENST00000506368 DHRS12A0PJE2 317 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 MRASO14807 208 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 NRP2O60462 931 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 CD247P20963 164 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 TNFSF9P41273 254 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 DGKDQ16760 1214 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 BROXQ5VW32 411 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 LCN8Q6JVE9 175 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 GALNT18Q6P9A2 607 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 LCLAT1Q6UWP7 414 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 GK5Q6ZS86 529 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 USP51Q70EK9 711 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 LSMEM2Q8N112 164 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 SHCBP1Q8NEM2 672 aa16.04■□□□□ 0.16
SCLT1-208ENST00000506368 CANT1Q8WVQ1 401 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms