RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 KLHL32Q96NJ5 620 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 KLF6Q99612 283 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 PARVAQ9NVD7 372 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 IFNKQ9P0W0 207 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 SMG1Q96Q15 3661 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 GOLGA4Q13439 2230 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 FAM149AA5PLN7 773 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 PIGNO95427 931 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 GYPCP04921 128 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 THEGLP0DJG4 465 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 GIMD1P0DJR0 217 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 RXRGP48443 463 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 TPI1P60174 286 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 MYLK3Q32MK0 819 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 CCDC157Q569K6 752 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 NYAP1Q6ZVC0 841 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 ZSWIM9Q86XI8 627 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 EPAS1Q99814 870 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 EDEM3Q9BZQ6 932 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 RETREG1Q9H6L5 497 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 DYRK4Q9NR20 520 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 GPR27Q9NS67 375 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 ETNK2Q9NVF9 386 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 UCKL1Q9NWZ5 548 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 NENFQ9UMX5 172 aa16.98■□□□□ 0.31
PDLIM7-215ENST00000506161 LAMA5O15230 3695 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 A0A087X0T9 212 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 CXorf51AA0A1B0GTR3 108 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ANKRD62A6NC57 917 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 IGLON5A6NGN9 336 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 PAK4O96013 591 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ITGAVP06756 1048 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 FAM228BP0C875 321 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ERCC2P18074 760 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ETFBP38117 255 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 UBASH3AP57075 661 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 STAT4Q14765 748 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 SUZ12Q15022 739 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ZNF542PQ5EBM4 170 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 AFMIDQ63HM1 303 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 NEK5Q6P3R8 708 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 FBXL19Q6PCT2 694 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ABI3BPQ7Z7G0 1075 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 IQCHQ86VS3 1027 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 SLC25A45Q8N413 288 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 THAP2Q9H0W7 228 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 ERVMER34-1Q9H9K5 563 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 PNMA8BQ9ULN7 279 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 APOBEC2Q9Y235 224 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 FREM2Q5SZK8 3169 aa16.97■□□□□ 0.31
PDLIM7-215ENST00000506161 LOC400499M0QZD8 3231 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 A0A1W2PQJ5 194 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 EEF2KO00418 725 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 TRIM38O00635 465 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 AREL1O15033 823 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 MUSKO15146 869 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 TNFSF14O43557 240 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 HNRNPA2B1P22626 353 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 AIF1P55008 147 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 YBEYP58557 167 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 RHOAP61586 193 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 SNRPD1P62314 119 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 SEMG2Q02383 582 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 SMTNL2Q2TAL5 461 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 DHRS13Q6UX07 377 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 RFX8Q6ZV50 586 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 FNIP1Q8TF40 1166 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 KLHDC7BQ96G42 594 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 PPP1R16AQ96I34 528 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 CNDP2Q96KP4 475 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 CDC6Q99741 560 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 C1QTNF2Q9BXJ5 285 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 CALN1Q9BXU9 219 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 SLC17A9Q9BYT1 436 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 CATSPERBQ9H7T0 1116 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 FTSJ1Q9UET6 329 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 KLF15Q9UIH9 416 aa16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 TPX2Q9ULW0 747 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-215ENST00000506161 FLNBO75369 2602 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 ENC1O14682 589 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 FGF10O15520 208 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 AP1G1O43747 822 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 DFNA5O60443 496 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 PRAMEF11O60813 436 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 POP4O95707 220 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 PRKCGP05129 697 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 MYF5P13349 255 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 TIMP2P16035 220 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 ACADVLP49748 655 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 DPYSQ14117 519 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 PARP15Q460N3 678 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms