RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 ANP32CO43423 234 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 SLC25A17O43808 307 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 TCEA3O75764 348 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 WEE2P0C1S8 567 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 DHRS4L1P0CG22 281 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 COMPP49747 757 aaPredicted RBP4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 PAPOLAP51003 745 aaKnown RBP4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 ADORA2A-AS1P86434 159 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 BNC1Q01954 994 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 BIRC2Q13490 618 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 CAPSQ13938 189 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 SLC18A3Q16572 532 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 KRTAP27-1Q3LI81 207 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 H1FNTQ75WM6 255 aaPredicted RBP4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 ARMC9Q7Z3E5 817 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 NR2C2APQ86WQ0 139 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 DENND6AQ8IWF6 608 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 MCPH1Q8NEM0 835 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 HSPH1Q92598 858 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 RNF183Q96D59 192 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 STN1Q9H668 368 aaKnown RBP4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 NOD2Q9HC29 1040 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 PLSCR4Q9NRQ2 329 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 MDFICQ9P1T7 246 aa4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 IFT80Q9P2H3 777 aaPredicted RBP4.4□□□□□ -1.71
SRFBP1-202ENST00000504881 PLSCR5A0PG75 271 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 CYSRT1A8MQ03 144 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 PEX12O00623 359 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 CNPP09543 421 aaKnown RBP4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 CENPAP49450 140 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 COASYQ13057 564 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 LPIN1Q14693 890 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 ANKRD1Q15327 319 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 TYW3Q6IPR3 259 aaKnown RBP4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 MON1AQ86VX9 555 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 HERC6Q8IVU3 1022 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 NKAPQ8N5F7 415 aaKnown RBP4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 ZMIZ2Q8NF64 920 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 TMEM170AQ8WVE7 144 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 COG8Q96MW5 612 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 ARPC5LQ9BPX5 153 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 LMAN2LQ9H0V9 348 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 ZNF556Q9HAH1 456 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 SLC45A1Q9Y2W3 748 aa4.39□□□□□ -1.71
SRFBP1-202ENST00000504881 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 A0A1B0GVM2 712 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 VWA3AA6NCI4 1184 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 CHRM4P08173 479 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 MYF6P23409 242 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 TTKP33981 857 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 RPL3P39023 403 aaKnown RBP4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 ARL4CP56559 192 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 TUBA1BP68363 451 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 ST3GAL1Q11201 340 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 GRAMD1BQ3KR37 738 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 DCAF6Q58WW2 860 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 CHD1LQ86WJ1 897 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 TCP11L2Q8N4U5 519 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 USP38Q8NB14 1042 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 SPATA5Q8NB90 893 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 RAB40AQ8WXH6 277 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 SH3KBP1Q96B97 665 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 TBC1D20Q96BZ9 403 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 YME1L1Q96TA2 773 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 C1QTNF4Q9BXJ3 329 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 IL25Q9H293 177 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 MROH8Q9H579 483 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 ITM2CQ9NQX7 267 aa4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 SPATS2LQ9NUQ6 558 aaKnown RBP4.38□□□□□ -1.71
SRFBP1-202ENST00000504881 DENND3A2RUS2 1198 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 SRRM3A6NNA2 597 aaPredicted RBP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 EBAG9O00559 213 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 SLC16A5O15375 505 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 KLK10O43240 276 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 ERVFC1-1P60608 527 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 EEF1A2Q05639 463 aaKnown RBP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 GRSF1Q12849 480 aaKnown RBP eCLIP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 SLC39A14Q15043 492 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 PLEKHO1Q53GL0 409 aaPredicted RBP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 IL20RBQ6UXL0 311 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 GSG1LQ6UXU4 331 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 CUZD1Q86UP6 607 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 MB21D2Q8IYB1 491 aaPredicted RBP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 CCDC105Q8IYK2 499 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 GDPD5Q8WTR4 605 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 DNASE2BQ8WZ79 361 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 CNOT9Q92600 299 aaKnown RBP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 TWNKQ96RR1 684 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 CLSTN3Q9BQT9 956 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 EPHX3Q9H6B9 360 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 ANKRD10Q9NXR5 420 aa4.37□□□□□ -1.71
SRFBP1-202ENST00000504881 A0A0U1RQJ8 604 aa4.36□□□□□ -1.71
SRFBP1-202ENST00000504881 FAM90A7PA6NKC0 464 aa4.36□□□□□ -1.71
SRFBP1-202ENST00000504881 FAM90A22PA8MWA6 464 aa4.36□□□□□ -1.71
SRFBP1-202ENST00000504881 FAM90A12PA8MX19 464 aa4.36□□□□□ -1.71
SRFBP1-202ENST00000504881 FAM90A23PA8MXZ1 464 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms