RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 FZD4Q9ULV1 537 aa8.15□□□□□ -1.1
RFC1-207ENST00000504554 ZFR2Q9UPR6 939 aaKnown RBP8.15□□□□□ -1.1
RFC1-207ENST00000504554 NCKAP1Q9Y2A7 1128 aa8.15□□□□□ -1.1
RFC1-207ENST00000504554 CA5BQ9Y2D0 317 aa8.15□□□□□ -1.1
RFC1-207ENST00000504554 FNDC3AQ9Y2H6 1198 aaKnown RBP8.15□□□□□ -1.1
RFC1-207ENST00000504554 SNX11Q9Y5W9 270 aa8.15□□□□□ -1.1
RFC1-207ENST00000504554 GON4LQ3T8J9 2241 aa8.15□□□□□ -1.1
RFC1-207ENST00000504554 A0A1W2PPC4 97 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 A0A1W2PR77 199 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 RASA4BC9J798 803 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 J3KR12 359 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 EEF2KO00418 725 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 KPNA3O00505 521 aaPredicted RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 INSIG1O15503 277 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 RASA4O43374 803 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 LATO43561 262 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 TOP3BO95985 862 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 ADRB1P08588 477 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 MYBL1P10243 752 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 GNSP15586 552 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 ERCC2P18074 760 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 CD27P26842 260 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 MAT2AP31153 395 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 DNA2P51530 1060 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 CCR5P51681 352 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 CCNHP51946 323 aaPredicted RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 AIF1P55008 147 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 TPI1P60174 286 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 SLC25A11Q02978 314 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 TBX2Q13207 712 aaPredicted RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 SERINC3Q13530 473 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 DPYSQ14117 519 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 SMTNL2Q2TAL5 461 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 HLA-BQ31612 363 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 ATP13A4Q4VNC1 1196 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 CARD16Q5EG05 197 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 PRAMEF14Q5SWL7 426 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 AFMIDQ63HM1 303 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 RETSATQ6NUM9 610 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 PPP1R2P3Q6NXS1 205 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 RFX8Q6ZV50 586 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 GAS2L3Q86XJ1 694 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 UMODL1-AS1Q8N2C9 162 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 PCDH20Q8N6Y1 951 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 TMIEQ8NEW7 156 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 KLK6Q92876 244 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 NUP85Q9BW27 656 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 CEP44Q9C0F1 390 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 SLC39A8Q9C0K1 460 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 PDFQ9HBH1 243 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 OSGEPQ9NPF4 335 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 CWC15Q9P013 229 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 HECAQ9UBI9 543 aaPredicted RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 LHX3Q9UBR4 397 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 SUSD2Q9UGT4 822 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 IL36AQ9UHA7 158 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.14□□□□□ -1.114e-8■■□□□ 11.4
RFC1-207ENST00000504554 BZW2Q9Y6E2 419 aaKnown RBP8.14□□□□□ -1.11
RFC1-207ENST00000504554 SCINQ9Y6U3 715 aa8.14□□□□□ -1.11
RFC1-207ENST00000504554 RALGAPA1Q6GYQ0 2036 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3DA0A087WVF3 549 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3IA0A087WXS9 549 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3EA0A087X179 549 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3KA0A087X1G2 549 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 SLC35F4A4IF30 521 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3FA6NER0 549 aaPredicted RBP8.13□□□□□ -1.11
RFC1-207ENST00000504554 LRRC72A6NJI9 287 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3LB9A6J9 549 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 C1QTNF3-AMACRE9PGA6 284 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 CBFA2T2O43439 604 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 BUB1O43683 1085 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 SH3BP5O60239 455 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 PRPSAP2O60256 369 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 OPHN1O60890 802 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 RNGTTO60942 597 aaKnown RBP8.13□□□□□ -1.11
RFC1-207ENST00000504554 MFAP3LO75121 409 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TMCC1O94876 653 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 SYPP08247 313 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 CD48P09326 243 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 TBC1D3HP0C7X1 549 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 RARAP10276 462 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 ITIH2P19823 946 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 AMPD1P23109 780 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 IL4RP24394 825 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 PCK1P35558 622 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 CTSKP43235 329 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 RGRP47804 291 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 PAPOLAP51003 745 aaKnown RBP8.13□□□□□ -1.11
RFC1-207ENST00000504554 NOVA1P51513 510 aaKnown RBP8.13□□□□□ -1.11
RFC1-207ENST00000504554 AFF3P51826 1226 aaKnown RBP8.13□□□□□ -1.11
RFC1-207ENST00000504554 IL9RQ01113 521 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 SLC20A2Q08357 652 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 FGL2Q14314 439 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 SHBQ15464 509 aa8.13□□□□□ -1.11
RFC1-207ENST00000504554 SLC18A3Q16572 532 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms