RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 DDX50Q9BQ39 737 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 MGME1Q9BQP7 344 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 CAB39LQ9H9S4 337 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 A0A096LPK6 155 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 GJB3O75712 270 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 LATS1O95835 1130 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 MBL2P11226 248 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 GMPRP36959 345 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 HTRA4P83105 476 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 FASTKD1Q53R41 847 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 TSTD2Q5T7W7 516 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 IL31Q6EBC2 164 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 DENND6AQ8IWF6 608 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 PLD6Q8N2A8 252 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 FEM1CQ96JP0 617 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 SLC22A12Q96S37 553 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 ACE2Q9BYF1 805 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 KCNK13Q9HB14 408 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 MROH6A6NGR9 719 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 GREM1O60565 184 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 DCTN3O75935 186 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 EPOP01588 193 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 C2P06681 752 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 RHOCP08134 193 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 CNPP09543 421 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 DLDP09622 509 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 NUMBP49757 651 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 IRX4P78413 519 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 ZNF177Q13360 481 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 PCLAFQ15004 111 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 DLG2Q15700 870 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 MBLAC2Q68D91 279 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 HERC6Q8IVU3 1022 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 C2CD4AQ8NCU7 369 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 PSKH2Q96QS6 385 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 CYP2S1Q96SQ9 504 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 ZNF358Q9NW07 568 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 SEPT3Q9UH03 358 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 ACTL7AQ9Y615 435 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 CCDC195A0A1B0GUA6 201 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 MPP1Q00013 466 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 CTBP1Q13363 440 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 SLC14A2Q15849 920 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 CCDC153Q494R4 210 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 PABPC1LQ4VXU2 614 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 CXorf57Q6NSI4 855 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 NLRP9Q7RTR0 991 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 ADAMTS19Q8TE59 1207 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 FAM167BQ9BTA0 163 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 MYLK2Q9H1R3 596 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 SMPD4Q9NXE4 827 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 UBA2Q9UBT2 640 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 DCTN4Q9UJW0 460 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 ASB3Q9Y575 518 aa21.56■■□□□ 1.04
UBE2D3-216ENST00000503742 GFRA2O00451 464 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 TGM5O43548 720 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 TSPAN3O60637 253 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SPATA31D3P0C874 917 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 FGF3P11487 239 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 GLDCP23378 1020 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SLC1A2P43004 574 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 POLD2P49005 469 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 OXCT1P55809 520 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SMAD3P84022 425 aaKnown RBP21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 CDK18Q07002 472 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 THOC5Q13769 683 aaKnown RBP21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 RFTN1Q14699 578 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SETDB1Q15047 1291 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SPATA31D4Q6ZUB0 917 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 BBS5Q8N3I7 341 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 OR13J1Q8NGT2 312 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 LRRC37BQ96QE4 947 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SPON2Q9BUD6 331 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SLC39A10Q9ULF5 831 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 SSX2IPQ9Y2D8 614 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 DENND4CQ5VZ89 1909 aa21.55■■□□□ 1.04
UBE2D3-216ENST00000503742 HLA-DPA1P20036 260 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 NCALDP61601 193 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 ZXDBP98169 803 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 IRF9Q00978 393 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 STX3Q13277 289 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 NEPROQ6NW34 567 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 FIBCD1Q8N539 461 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 CLP1Q92989 425 aaKnown RBP21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 C20orf27Q9GZN8 174 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 TRPC7Q9HCX4 862 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 COPG2Q9UBF2 871 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 BPTFQ12830 3046 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 E2F8A0AVK6 867 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 SERPINF2P08697 491 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 CR2P20023 1033 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 TXNDC8Q6A555 127 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 LILRA6Q6PI73 481 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 Q6ZNB5 142 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 KIAA0408Q6ZU52 694 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 ARL14EPQ8N8R7 260 aaPredicted RBP21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 ERP27Q96DN0 273 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 TRIB3Q96RU7 358 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 ZNF395Q9H8N7 513 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms