RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 B4GALNT2Q8NHY0 566 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 EME1Q96AY2 570 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 CAMK1GQ96NX5 476 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 LBHD1Q9BQE6 289 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 USP44Q9H0E7 712 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC25A18Q9H1K4 315 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 CXorf56Q9H5V9 222 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 SPAG4Q9NPE6 437 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ENTPD7Q9NQZ7 604 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ATP8A2Q9NTI2 1148 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 GRHL1Q9NZI5 618 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 HCN3Q9P1Z3 774 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 PEMTQ9UBM1 199 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 AASSQ9UDR5 926 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 PLEKHB1Q9UF11 243 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 CDH22Q9UJ99 828 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 AGO2Q9UKV8 859 aaKnown RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 NAALADL1Q9UQQ1 740 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF335Q9H4Z2 1342 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
HMGB1P35-201ENST00000503360 MST1RQ04912 1400 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TRBV5-7A0A0A0MS05 114 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 A0A0U1RQG5 324 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 A0A1W2PPC1 479 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 A0A1W2PPH5 198 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 PABPN1LA6NDY0 278 aaKnown RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 DDTLA6NHG4 134 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF500O60304 480 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMCC1O94876 653 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 UBL4AP11441 157 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 COX7A2P14406 83 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC16A2P36021 539 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 DPP6P42658 865 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 HARS2P49590 506 aaKnown RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 CCR9P51686 369 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ARSFP54793 590 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 EFNB1P98172 346 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 GAD2Q05329 585 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 PTP4A2Q12974 167 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ME3Q16798 604 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SMTNL2Q2TAL5 461 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 EDRF1Q3B7T1 1238 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC9B1Q4ZJI4 515 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 PIK3CD-AS1Q5SR53 167 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 C6orf10Q5SRN2 563 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 CCDC30Q5VVM6 783 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TBC1D9BQ66K14 1250 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZNF280DQ6N043 979 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 C17orf99Q6UX52 265 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ATF7IPQ6VMQ6 1270 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 DSTYKQ6XUX3 929 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 C1orf122Q6ZSJ8 110 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 MOB3CQ70IA8 216 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 RRM2BQ7LG56 351 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 PRSS45Q7RTY3 260 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TBC1D1Q86TI0 1168 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 CUZD1Q86UP6 607 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TRIM74Q86UV6 250 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TRIM73Q86UV7 250 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 MMP21Q8N119 569 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC25A41Q8N5S1 370 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 DPP10Q8N608 796 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC44A5Q8NCS7 719 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TDRD7Q8NHU6 1098 aaKnown RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 NFKBIDQ8NI38 313 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 KCNG4Q8TDN1 519 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 GDPD5Q8WTR4 605 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 HDAC7Q8WUI4 952 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 DNASE2BQ8WZ79 361 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 C7orf26Q96N11 449 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZPBPQ9BS86 351 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 PDCL3Q9H2J4 239 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 PCDHB16Q9NRJ7 776 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 THSD1Q9NS62 852 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 OLA1Q9NTK5 396 aaKnown RBP2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 BABAM1Q9NWV8 329 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZDHHC7Q9NXF8 308 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 KCND2Q9NZV8 630 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 FBXO40Q9UH90 709 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 SARDHQ9UL12 918 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 RAP2CQ9Y3L5 183 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 CLDN16Q9Y5I7 305 aa2.59□□□□□ -1.99
HMGB1P35-201ENST00000503360 TEX13CA0A0J9YWL9 993 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ARHGAP10A1A4S6 786 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 A6NNC1 897 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 FAM157AC9JC47 383 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CCER2I3L3R5 266 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 ACOT8O14734 319 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 RNMTO43148 476 aaKnown RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TNFSF14O43557 240 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TIMM44O43615 452 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 SLC25A17O43808 307 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 KIF1CO43896 1103 aaKnown RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 TACC1O75410 805 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 GALTP07902 379 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 CHRNB1P11230 501 aa2.58□□□□□ -2
HMGB1P35-201ENST00000503360 UNGP13051 313 aaPredicted RBP2.58□□□□□ -2
HMGB1P35-201ENST00000503360 YWHAQP27348 245 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms