RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 KTI12Q96EK9 354 aaPredicted RBP5.18□□□□□ -1.58
SSR3-209ENST00000498205 FAM167BQ9BTA0 163 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 LRRCC1Q9C099 1032 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 FAM234AQ9H0X4 552 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 SPAG4Q9NPE6 437 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 PNRC2Q9NPJ4 139 aaKnown RBP5.18□□□□□ -1.58
SSR3-209ENST00000498205 KCND3Q9UK17 655 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 SUFUQ9UMX1 484 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 COG5Q9UP83 839 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 RIPOR2Q9Y4F9 1068 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 SQORQ9Y6N5 450 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 TTC41PQ6P2S7 1318 aa5.18□□□□□ -1.58
SSR3-209ENST00000498205 CHD2O14647 1828 aaKnown RBP5.18□□□□□ -1.58
SSR3-209ENST00000498205 RFX7Q2KHR2 1363 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 CEP170BQ9Y4F5 1589 aaPredicted RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 CXorf65A6NEN9 183 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SPTLC2O15270 562 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 ZNF500O60304 480 aaPredicted RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 LETM1O95202 739 aaPredicted RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 METTL18O95568 372 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 DHRS4L1P0CG22 281 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 PEPDP12955 493 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 MX1P20591 662 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 POLD2P49005 469 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 GOLGA8FQ08AF8 430 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 POSTNQ15063 836 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 TAF7Q15545 349 aaPredicted RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 ZNF260Q3ZCT1 412 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 LEXMQ3ZCV2 418 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 CTXN3Q4LDR2 81 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 RUNDC3AQ59EK9 446 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 MTFR2Q6P444 385 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 B4GALNT4Q76KP1 1039 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SYT13Q7L8C5 426 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 CAMK1DQ8IU85 385 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SCN4BQ8IWT1 228 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SLC25A41Q8N5S1 370 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 USP38Q8NB14 1042 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 BICD2Q8TD16 824 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SLC25A28Q96A46 364 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 MSI2Q96DH6 328 aaKnown RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 ZNF333Q96JL9 665 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 MEIS3Q99687 375 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 THUMPD2Q9BTF0 503 aaKnown RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 CADM1Q9BY67 442 aaKnown RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 TM6SF1Q9BZW5 370 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 ACTR5Q9H9F9 607 aaPredicted RBP5.17□□□□□ -1.58
SSR3-209ENST00000498205 NOD2Q9HC29 1040 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 TSPYL4Q9UJ04 414 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 DERAQ9Y315 318 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 ATP6V1DQ9Y5K8 247 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 CCDC171Q6TFL3 1326 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 RAD50Q92878 1312 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 SLIT3O75094 1523 aa5.17□□□□□ -1.58
SSR3-209ENST00000498205 TMEM272A0A1B0GTI8 110 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 NPIPB13A6NJU9 1138 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 CD8B2A6NJW9 211 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 NPIPB4C9JG80 1138 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 INSIG1O15503 277 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 TOMM40O96008 361 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 CHMLP26374 656 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 HSPA4P34932 840 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 RASSF2P50749 326 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 MTHFSDQ2M296 383 aaKnown RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 PRTGQ2VWP7 1150 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 TTLL5Q6EMB2 1281 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 MTERF4Q7Z6M4 381 aaKnown RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 ERC1Q8IUD2 1116 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 KCNH5Q8NCM2 988 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 FAM110DQ8TAY7 271 aaPredicted RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 TMEM174Q8WUU8 243 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 NCSTNQ92542 709 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 KCNJ9Q92806 393 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 KAT2AQ92830 837 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 EME1Q96AY2 570 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 ZBTB9Q96C00 473 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 TRIM44Q96DX7 344 aaPredicted RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 KIF1BPQ96EK5 621 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 HDHD5Q9BXW7 423 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.16□□□□□ -1.58
SSR3-209ENST00000498205 ALDH8A1Q9H2A2 487 aaPredicted RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 AAMDCQ9H7C9 122 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 IL21RQ9HBE5 538 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 RRAGDQ9NQL2 400 aaPredicted RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 TMEM248Q9NWD8 314 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 FBXO40Q9UH90 709 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 NOL7Q9UMY1 257 aaKnown RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 DDX49Q9Y6V7 483 aaKnown RBP5.16□□□□□ -1.58
SSR3-209ENST00000498205 UTYO14607 1347 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 TMEM94Q12767 1356 aa5.16□□□□□ -1.58
SSR3-209ENST00000498205 MRC1P22897 1456 aa5.15□□□□□ -1.58
SSR3-209ENST00000498205 HIP1O00291 1037 aa5.15□□□□□ -1.59
SSR3-209ENST00000498205 KRT38O76015 456 aa5.15□□□□□ -1.59
SSR3-209ENST00000498205 CRYABP02511 175 aaKnown RBP5.15□□□□□ -1.59
SSR3-209ENST00000498205 PRKCHP24723 683 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms