RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RFX8Q6ZV50 586 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 IQCHQ86VS3 1027 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 RHOT2Q8IXI1 618 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 TXLNBQ8N3L3 684 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 OR6K2Q8NGY2 324 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 RHBDD1Q8TEB9 315 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 CNTNAP3BQ96NU0 1288 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 KCTD15Q96SI1 283 aaPredicted RBP15.57■□□□□ 0.08
NUP50-219ENST00000497960 ELF4Q99607 663 aaPredicted RBP15.57■□□□□ 0.08
NUP50-219ENST00000497960 CDC6Q99741 560 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 OSBPL1AQ9BXW6 950 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 CNTNAP3Q9BZ76 1288 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 UBA2Q9UBT2 640 aaPredicted RBP15.57■□□□□ 0.08
NUP50-219ENST00000497960 PCOLCE2Q9UKZ9 415 aa15.57■□□□□ 0.08
NUP50-219ENST00000497960 A0A1B0GTQ1 180 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 ARHGAP42A6NI28 874 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 SLC31A1O15431 190 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 YKT6O15498 198 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 TRIM16O95361 564 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 AKT2P31751 481 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 ARRB1P49407 418 aaPredicted RBP15.56■□□□□ 0.08
NUP50-219ENST00000497960 NXPH1P58417 271 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 BOLA3Q53S33 107 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 ZNF805Q5CZA5 627 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 ATXN7L2Q5T6C5 722 aaPredicted RBP15.56■□□□□ 0.08
NUP50-219ENST00000497960 DBX2Q6ZNG2 339 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 PARS2Q7L3T8 475 aaKnown RBP15.56■□□□□ 0.08
NUP50-219ENST00000497960 OXR1Q8N573 874 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 KLK6Q92876 244 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 RAB7BQ96AH8 199 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 CELF6Q96J87 481 aaKnown RBP15.56■□□□□ 0.08
NUP50-219ENST00000497960 FEM1CQ96JP0 617 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 KLC2Q9H0B6 622 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 LRRC19Q9H756 370 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 ZWILCHQ9H900 591 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 IP6K2Q9UHH9 426 aa15.56■□□□□ 0.08
NUP50-219ENST00000497960 REXO2Q9Y3B8 237 aaKnown RBP15.56■□□□□ 0.08
NUP50-219ENST00000497960 PLXNA2O75051 1894 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 C16orf96A6NNT2 1141 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 H3BRJ5 948 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 NEMP1O14524 444 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 AP1G1O43747 822 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 CBFA2T3O75081 653 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 UGT2B4P06133 528 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 PRLRP16471 622 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 ERCC2P18074 760 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 GKP32189 559 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 ARL4AP40617 200 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 GRK6P43250 576 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 HCAR3P49019 387 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 RPS21P63220 83 aaKnown RBP15.55■□□□□ 0.08
NUP50-219ENST00000497960 IL9RQ01113 521 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 ZNF284Q2VY69 593 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 PRAMEF14Q5SWL7 426 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 KIAA1161Q6NSJ0 714 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 ZSCAN30Q86W11 494 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 SLC35G2Q8TBE7 412 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 KLHDC7BQ96G42 594 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 ERVMER34-1Q9H9K5 563 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 LCMT1Q9UIC8 334 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 TFR2Q9UP52 801 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 APOBEC2Q9Y235 224 aaKnown RBP15.55■□□□□ 0.08
NUP50-219ENST00000497960 FADS3Q9Y5Q0 445 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 CHD8Q9HCK8 2581 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 TRPM6Q9BX84 2022 aa15.55■□□□□ 0.08
NUP50-219ENST00000497960 TMEM110-MUSTN1A8MSY1 372 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 MYO1FO00160 1098 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 TSPAN6O43657 245 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 PRAMEF11O60813 436 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 ITGAVP06756 1048 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 FTH1P19P0C7X4 201 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 HNRNPA2B1P22626 353 aaKnown RBP15.54■□□□□ 0.08
NUP50-219ENST00000497960 NOP2P46087 812 aaKnown RBP15.54■□□□□ 0.08
NUP50-219ENST00000497960 PAPOLAP51003 745 aaKnown RBP15.54■□□□□ 0.08
NUP50-219ENST00000497960 SMTNL2Q2TAL5 461 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 SEL1L3Q68CR1 1132 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 GDPD4Q6W3E5 623 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 CYP4V2Q6ZWL3 525 aaPredicted RBP15.54■□□□□ 0.08
NUP50-219ENST00000497960 GLRX5Q86SX6 157 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 TMEM145Q8NBT3 493 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 NETO2Q8NC67 525 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 HSPH1Q92598 858 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 KLHL32Q96NJ5 620 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 MYOCQ99972 504 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 SLC39A8Q9C0K1 460 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 CWC15Q9P013 229 aaKnown RBP15.54■□□□□ 0.08
NUP50-219ENST00000497960 ZFR2Q9UPR6 939 aaKnown RBP15.54■□□□□ 0.08
NUP50-219ENST00000497960 CA5BQ9Y2D0 317 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 MFHAS1Q9Y4C4 1052 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 DOCK9Q9BZ29 2069 aa15.54■□□□□ 0.08
NUP50-219ENST00000497960 A0A0A6YYK5 440 aaPredicted RBP15.53■□□□□ 0.08
NUP50-219ENST00000497960 J3KR12 359 aa15.53■□□□□ 0.08
NUP50-219ENST00000497960 DFFAO00273 331 aa15.53■□□□□ 0.08
NUP50-219ENST00000497960 IL1R2P27930 398 aa15.53■□□□□ 0.08
NUP50-219ENST00000497960 SSR1P43307 286 aaKnown RBP15.53■□□□□ 0.08
NUP50-219ENST00000497960 SGCGQ13326 291 aa15.53■□□□□ 0.08
NUP50-219ENST00000497960 CYTH1Q15438 398 aa15.53■□□□□ 0.08
NUP50-219ENST00000497960 DPYSL2Q16555 572 aa15.53■□□□□ 0.08
NUP50-219ENST00000497960 TMEM259Q4ZIN3 620 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms