RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 HDAC8Q9BY41 377 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 ZDHHC5Q9C0B5 715 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 ZWILCHQ9H900 591 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 PCDH18Q9HCL0 1135 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 DNAAF2Q9NVR5 837 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 CTTNBP2NLQ9P2B4 639 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 RNF14Q9UBS8 474 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 MFHAS1Q9Y4C4 1052 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 PI4KAP42356 2102 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 A0A1B0GVT2 93 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 MED19A0JLT2 244 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 CES2O00748 559 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 RIOK3O14730 519 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 DAPK3O43293 454 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 PRAMEF11O60813 436 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 PALMO75781 387 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 PROSCO94903 275 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 POP4O95707 220 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 AMPD1P23109 780 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 AFF3P51826 1226 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 SNRPD1P62314 119 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 RACK1P63244 317 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 ATP13A4Q4VNC1 1196 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 ATXN7L2Q5T6C5 722 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 C11orf63Q6NUN7 778 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 LAYNQ6UX15 382 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 ERN2Q76MJ5 926 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 TRIM69Q86WT6 500 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 ZNF354CQ86Y25 554 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 CEP112Q8N8E3 955 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 MNS1Q8NEH6 495 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 OR6K2Q8NGY2 324 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 LRIG1Q96JA1 1093 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 CSPG4P5Q96PW8 444 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 ETNK2Q9NVF9 386 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 LHX3Q9UBR4 397 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 TPX2Q9ULW0 747 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 HYOU1Q9Y4L1 999 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 SPTBN2O15020 2390 aa16.21■□□□□ 0.19
CTDSP1-214ENST00000497677 CACNA1EQ15878 2313 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 PCDH15Q96QU1 1955 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 CNOT1A5YKK6 2376 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 GRID2IPA4D2P6 1211 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 ARHGAP42A6NI28 874 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 UPK3BL1B0FP48 263 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 UPK3BL2E5RIL1 263 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 H3BRJ5 948 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 FANCGO15287 622 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 WNT1P04628 370 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 CD59P13987 128 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 ITGB7P26010 798 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 GRIA4P48058 902 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 ATXN3P54252 364 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 TAS2R40P59535 323 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 FOXK2Q01167 660 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 CKAP4Q07065 602 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 KIF19Q2TAC6 998 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 UAP1L1Q3KQV9 507 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 PPM1JQ5JR12 505 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 MEI1Q5TIA1 1274 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 ARHGAP36Q6ZRI8 547 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 PIP4P1Q86T03 277 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 LRRC57Q8N9N7 239 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 SLC6A18Q96N87 628 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 IL21RQ9HBE5 538 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 PREBQ9HCU5 417 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 UBA2Q9UBT2 640 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 SNX12Q9UMY4 172 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 ANKRD6Q9Y2G4 727 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 KNL1Q8NG31 2342 aa16.2■□□□□ 0.18
CTDSP1-214ENST00000497677 A0A1W2PR77 199 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 VILLO15195 856 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 KCNK5O95279 499 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 CD48P09326 243 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 ADRB3P13945 408 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 ARL4AP40617 200 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 CCDC15Q0P6D6 951 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 MMRN1Q13201 1228 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 HLA-BQ31612 363 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 ZNF805Q5CZA5 627 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 NEK5Q6P3R8 708 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 PARS2Q7L3T8 475 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 PEX26Q7Z412 305 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 DAAM2Q86T65 1068 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 RYBPQ8N488 228 aaPredicted RBP16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 LZTR1Q8N653 840 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 ZDHHC6Q9H6R6 413 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 DYRK4Q9NR20 520 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 ZFR2Q9UPR6 939 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 SNX11Q9Y5W9 270 aa16.19■□□□□ 0.18
CTDSP1-214ENST00000497677 CEP192Q8TEP8 1941 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 C16orf96A6NNT2 1141 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 MIF4GDA9UHW6 222 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 KRIT1O00522 736 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 GIPC1O14908 333 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 INSIG1O15503 277 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms