RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 MAATS1Q7Z4T9 603 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 POLNQ7Z5Q5 900 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 DNAJB7Q7Z6W7 309 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 C14orf80Q86SX3 495 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 MON1AQ86VX9 555 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 CCDC25Q86WR0 208 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 CIR1Q86X95 450 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 FAM129CQ86XR2 697 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF354CQ86Y25 554 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 IGDCC3Q8IVU1 814 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 UNC45BQ8IWX7 931 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 IFT20Q8IY31 132 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 RNF168Q8IYW5 571 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ARHGAP18Q8N392 663 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 PQLC3Q8N755 202 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 C12orf76Q8N812 135 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 FAM71DQ8N9W8 422 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 GLIS1Q8NBF1 620 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 CCNYQ8ND76 341 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 CMASQ8NFW8 434 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ACTL9Q8TC94 416 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 PHOSPHO2Q8TCD6 241 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 SPPL3Q8TCT6 385 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 GDPD5Q8WTR4 605 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 C2orf15Q8WU43 125 aaKnown RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 DEPDC1BQ8WUY9 529 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 MAIP1Q8WWC4 291 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 RSAD2Q8WXG1 361 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 P3H4Q92791 437 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 PWWP2AQ96N64 755 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 CSPG4P5Q96PW8 444 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 RNF157Q96PX1 679 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 JMJD8Q96S16 334 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 CYP2S1Q96SQ9 504 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 TMEM121Q9BTD3 319 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 C11orf84Q9BUA3 381 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 SLITRK6Q9H5Y7 841 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF334Q9HCZ1 680 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 TLR9Q9NR96 1032 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 GKN1Q9NS71 199 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ABCC13Q9NSE7 274 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ETNK2Q9NVF9 386 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ARGLU1Q9NWB6 273 aaPredicted RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 HCFC1R1Q9NWW0 138 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 TRPM5Q9NZQ8 1165 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 MARCH2Q9P0N8 246 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 FAM153AQ9UHL3 310 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 MSRAQ9UJ68 235 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 FBXW11Q9UKB1 542 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 UTP11Q9Y3A2 253 aaKnown RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF638Q14966 1978 aaKnown RBP4.9□□□□□ -1.63
CMSS1-209ENST00000497345 DNAH12Q6ZR08 3092 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF840PA6NDX5 716 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 C2orf71A6NGG8 1288 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 GOLGA8MH3BSY2 632 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 DFFAO00273 331 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MCF2LO15068 1137 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 KCNN4O15554 427 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 IRAK2O43187 625 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 COCHO43405 550 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TLR5O60602 858 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CLASP2O75122 1294 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ERLIN1O75477 346 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RFPL2O75678 378 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 GLUD1P00367 558 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 APOEP02649 317 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 LINC00271P0C7V0 271 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CSH1P0DML2 217 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CSH2P0DML3 217 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RBP3P10745 1247 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ATF2P15336 505 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 HMGA1P17096 107 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 GABRR2P28476 465 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RBL1P28749 1068 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 EPHB2P29323 1055 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CCR1P32246 355 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ATP5C1P36542 298 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RPL21P46778 160 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CXCR3P49682 368 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TUBP50607 506 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 PLTPP55058 493 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 VCPP55072 806 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MVKQ03426 396 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 AP1B1Q10567 949 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 SMARCB1Q12824 385 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 GPS1Q13098 491 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 KLF1Q13351 362 aaPredicted RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 BYSLQ13895 437 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TFDP2Q14188 446 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CLUL1Q15846 466 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 PPP2R5EQ16537 467 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CCNG2Q16589 344 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 VMACQ2NL98 169 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 GLE1Q53GS7 698 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 HECTD3Q5T447 861 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 STXBP5Q5T5C0 1151 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 FAXCQ5TGI0 409 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 IZUMO3Q5VZ72 239 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms