RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 GOLGA8SH3BPF8 625 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 AREL1O15033 823 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 RAMP2O60895 175 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 CD160O95971 181 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 MPOP05164 745 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 PNMA6AP0CW24 399 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 MMP8P22894 467 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 RBMS1P29558 406 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 PDE1CQ14123 709 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 GRM3Q14832 879 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 NR0B2Q15466 257 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 MYLK3Q32MK0 819 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 LVRNQ6Q4G3 990 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 RBM44Q6ZP01 1051 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 NLRP14Q86W24 1093 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 DRC7Q8IY82 874 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 KCNE4Q8WWG9 221 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 CPA5Q8WXQ8 436 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 CENPIQ92674 756 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 NTAN1Q96AB6 310 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 CENPTQ96BT3 561 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 BOCQ9BWV1 1114 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 NUP62CLQ9H1M0 184 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 DKK3Q9UBP4 350 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 SSUH2Q9Y2M2 353 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 FCF1Q9Y324 198 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 MFHAS1Q9Y4C4 1052 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 AHCTF1Q8WYP5 2266 aa17.1■□□□□ 0.33
TRAPPC3-207ENST00000497251 TMX2-CTNND1H3BSU7 103 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 RAD51BO15315 384 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 KDELR3O43731 214 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 CYP1A1P04798 512 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 PEX5P50542 639 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 CXADRP78310 365 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 ATP11AP98196 1134 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 CDR2Q01850 454 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 TRNP1Q6NT89 227 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 RWDD4Q6NW29 188 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 ZNF605Q86T29 641 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 RYBPQ8N488 228 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 SCG3Q8WXD2 468 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 TBC1D31Q96DN5 1066 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 GDAP1L1Q96MZ0 367 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 SLC46A1Q96NT5 459 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 SLC13A1Q9BZW2 595 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 TM6SF2Q9BZW4 377 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 ASCL3Q9NQ33 180 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 TMPRSS4Q9NRS4 437 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 RP1P56715 2156 aa17.09■□□□□ 0.33
TRAPPC3-207ENST00000497251 C2CD4BA6NLJ0 364 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 RNF103O00237 685 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 KRIT1O00522 736 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 TM7SF2O76062 418 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 TPM2P07951 284 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 MMEP08473 750 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 AIF1P55008 147 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 GSCP56915 257 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 YBEYP58557 167 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 CCDC14Q49A88 953 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 ZNF542PQ5EBM4 170 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 GDPD4Q6W3E5 623 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 EFL1Q7Z2Z2 1120 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 TTC7BQ86TV6 843 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 FSTL5Q8N475 847 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 ARL14Q8N4G2 192 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 LMX1AQ8TE12 382 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 RXFP2Q8WXD0 754 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 CPEB1Q9BZB8 566 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 TTYH3Q9C0H2 523 aa17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 METTL5Q9NRN9 209 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-207ENST00000497251 CPED1A4D0V7 1026 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 C1QL1O75973 258 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 NEBLO76041 1014 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 LRIG2O94898 1065 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 ANXA6P08133 673 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 ACVRL1P37023 503 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 ABL2P42684 1182 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 CFHR1Q03591 330 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 ELP6Q0PNE2 266 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 EIF2B5Q13144 721 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 EIF3IQ13347 325 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 CDKN3Q16667 212 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 C6orf132Q5T0Z8 1188 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 MACC1Q6ZN28 852 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 ZNF843Q8N446 348 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 OR6C4Q8NGE1 309 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 ATL2Q8NHH9 583 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 WDR36Q8NI36 951 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 APOBEC3BQ9UH17 382 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 KLF15Q9UIH9 416 aa17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 NOCTQ9UK39 431 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-207ENST00000497251 SPTA1P02549 2419 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms