RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GABPB2Q8TAK5 448 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 SEPT8Q92599 483 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 RPRD1AQ96P16 312 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 TMEM175Q9BSA9 504 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 ZNF212Q9UDV6 495 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 ACOT9Q9Y305 439 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 MAGEC1O60732 1142 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 DIAPH2O60879 1101 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 MMP2P08253 660 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 TPBGLP0DKB5 382 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 CRABP2P29373 138 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 IL10RBQ08334 325 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 TSNAXIP1Q2TAA8 658 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 SNX30Q5VWJ9 437 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 MFSD6LQ8IWD5 586 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 CALML6Q8TD86 181 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 ELMO2Q96JJ3 720 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 GATA5Q9BWX5 397 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 DCLRE1BQ9H816 532 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 FBXO5Q9UKT4 447 aa13.19□□□□□ -0.3
GARNL3-220ENST00000496711 RUVBL2Q9Y230 463 aaKnown RBP13.19□□□□□ -0.3
GARNL3-220ENST00000496711 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 A0A087X1B8 175 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 TLR5O60602 858 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 PAPSS2O95340 614 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 SBK3P0C264 359 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 ZDHHC11BP0C7U3 371 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 GNAZP19086 355 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 GLRBP48167 497 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 CCNG1P51959 295 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 KPNA2P52292 529 aaKnown RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 YBEYP58557 167 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 MXRA7P84157 204 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 ZNF460Q14592 562 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 TSTD2Q5T7W7 516 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 VWA5B1Q5TIE3 1220 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 CIR1Q86X95 450 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 CEP97Q8IW35 865 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 FSTL5Q8N475 847 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 TMEM151AQ8N4L1 468 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 TDRD5Q8NAT2 981 aaKnown RBP13.18□□□□□ -0.3
GARNL3-220ENST00000496711 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 FBXO27Q8NI29 283 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 DRC3Q9H069 523 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 CCSER2Q9H7U1 834 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 XPR1Q9UBH6 696 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 PLA2G4CQ9UP65 541 aa13.18□□□□□ -0.3
GARNL3-220ENST00000496711 SLC38A8A6NNN8 435 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 VGLL3A8MV65 326 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 NT5C1B-RDH14C9J2C7 533 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 H0Y3Z8 333 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 GALTP07902 379 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 ATF6P18850 670 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 TACR2P21452 398 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 HK2P52789 917 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 PGGT1BP53609 377 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 SLC12A2P55011 1212 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 POU4F1Q01851 419 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 USP4Q13107 963 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 DUSP4Q13115 394 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 SERINC3Q13530 473 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
GARNL3-220ENST00000496711 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 NADSYN1Q6IA69 706 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 EPGNQ6UW88 154 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 FAM43BQ6ZT52 329 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-220ENST00000496711 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 TADA1Q96BN2 335 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 ILKAPQ9H0C8 392 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-220ENST00000496711 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-220ENST00000496711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-220ENST00000496711 RAP2CQ9Y3L5 183 aa13.17□□□□□ -0.3
GARNL3-220ENST00000496711 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 TARM1B6A8C7 271 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 F5H5T6 163 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 KIF3CO14782 793 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 OR1E1P30953 314 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 PBX3P40426 434 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 GRIA4P48058 902 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 CLCN5P51795 746 aa13.16□□□□□ -0.3
GARNL3-220ENST00000496711 TAS2R39P59534 338 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms