RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CTAGE8P0CG41 777 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 CXCL12P48061 93 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 DHX34Q14147 1143 aaKnown RBP22.02■■□□□ 1.12
C9orf3-222ENST00000496567 PARP6Q2NL67 630 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 FAM182AQ5T1J6 154 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 ZNF776Q68DI1 518 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-222ENST00000496567 CTAGE6Q86UF2 777 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 CTAGE4Q8IX94 777 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.02■■□□□ 1.12
C9orf3-222ENST00000496567 ERLEC1Q96DZ1 483 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 OSBPL1AQ9BXW6 950 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 PCDH9Q9HC56 1237 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 PPM1HQ9ULR3 514 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 TCRBV21S2A2A0A5A6 115 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 C1QTNF3-AMACRE9PGA6 284 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 LEFTY1O75610 366 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 SERPINA4P29622 427 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 COPAP53621 1224 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 DR1Q01658 176 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 BCL2L1Q07817 233 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 NIPAL4Q0D2K0 466 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 PRPSAP1Q14558 356 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 SLC14A2Q15849 920 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 ARSIQ5FYB1 569 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 FAM46CQ5VWP2 391 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 SYDE1Q6ZW31 735 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-222ENST00000496567 TMPRSS6Q8IU80 811 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 TSTD1Q8NFU3 115 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 GRIN3AQ8TCU5 1115 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 L2HGDHQ9H9P8 463 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 POLR3BQ9NW08 1133 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-222ENST00000496567 SPATA6Q9NWH7 488 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-222ENST00000496567 WASF2Q9Y6W5 498 aa22.01■■□□□ 1.11
C9orf3-222ENST00000496567 TTC24A2A3L6 582 aaPredicted RBP22■■□□□ 1.11
C9orf3-222ENST00000496567 IL1BP01584 269 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 KRT14P02533 472 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 ETS1P14921 441 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 CA4P22748 312 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 CD86P42081 329 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 SATB1Q01826 763 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 PPP1R7Q15435 360 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 MAATS1Q7Z4T9 603 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 MMAAQ8IVH4 418 aaKnown RBP22■■□□□ 1.11
C9orf3-222ENST00000496567 GLIS1Q8NBF1 620 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 PIP4K2CQ8TBX8 421 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 CCHCR1Q8TD31 782 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 ZNF641Q96N77 438 aaPredicted RBP22■■□□□ 1.11
C9orf3-222ENST00000496567 MKRN2Q9H000 416 aaKnown RBP22■■□□□ 1.11
C9orf3-222ENST00000496567 VPS45Q9NRW7 570 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 C2orf42Q9NWW7 574 aa22■■□□□ 1.11
C9orf3-222ENST00000496567 AAR2Q9Y312 384 aaKnown RBP22■■□□□ 1.11
C9orf3-222ENST00000496567 GOLGA6CA6NDK9 693 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GOLGA6BA6NDN3 693 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GJB3O75712 270 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 ANXA9O76027 345 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PAPSS2O95340 614 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-222ENST00000496567 ADH1BP00325 375 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 CTSLP07711 333 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GOLGA6DP0CG33 693 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PSMB4P28070 264 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GKP32189 559 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 RPL22P35268 128 aaKnown RBP21.99■■□□□ 1.11
C9orf3-222ENST00000496567 FDFT1P37268 417 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 ZBTB16Q05516 673 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GDPD4Q6W3E5 623 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 CAMKK1Q8N5S9 505 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 TMEM105Q8N8V8 129 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PRCCQ92733 491 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PPP1R16AQ96I34 528 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 RBM15Q96T37 977 aaKnown RBP eCLIP21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SUV39H2Q9H5I1 410 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GOLGA6AQ9NYA3 693 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 FAM153AQ9UHL3 310 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SOCS5O75159 536 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 UGT2B4P06133 528 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 MMP2P08253 660 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 ZSCAN5DPP0CG00 497 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 C7P10643 843 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PTGIRP43119 386 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 GEMP55040 296 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SKOR1P84550 965 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 TRIP13Q15645 432 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-222ENST00000496567 CST6Q15828 149 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PRUNE1Q86TP1 453 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 PRPF39Q86UA1 669 aaKnown RBP21.99■■□□□ 1.11
C9orf3-222ENST00000496567 CAMK1DQ8IU85 385 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SPATA22Q8NHS9 363 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 TADA1Q96BN2 335 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SIPA1Q96FS4 1042 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 MRGPRX1Q96LB2 322 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 CARD6Q9BX69 1037 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SARDHQ9UL12 918 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 SCML1Q9UN30 329 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 NEU2Q9Y3R4 380 aa21.99■■□□□ 1.11
C9orf3-222ENST00000496567 A0A1W2PQ67 120 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 KPNA3O00505 521 aaPredicted RBP21.98■■□□□ 1.11
C9orf3-222ENST00000496567 PIGNO95427 931 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 METTL18O95568 372 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 APBB3O95704 486 aa21.98■■□□□ 1.11
C9orf3-222ENST00000496567 DNTTP04053 509 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms