RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 A6NNZ2 444 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 C1QTNF9BB2RNN3 333 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 GYPCP04921 128 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 C1QTNF9P0C862 333 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 GRM3Q14832 879 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 MYLK3Q32MK0 819 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 ATXN7L2Q5T6C5 722 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-213ENST00000496347 KYAT3Q6YP21 454 aaKnown RBP15.95■□□□□ 0.14
HDAC4-213ENST00000496347 LEKR1Q6ZMV7 388 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 DNAAF5Q86Y56 855 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 CHCHD4Q8N4Q1 142 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 KDF1Q8NAX2 398 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-213ENST00000496347 DENND6BQ8NEG7 585 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 VOPP1Q96AW1 172 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 KLHDC7BQ96G42 594 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 FEM1CQ96JP0 617 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 ZWILCHQ9H900 591 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 GPR27Q9NS67 375 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 IFNKQ9P0W0 207 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 DKK3Q9UBP4 350 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 PCSK1NQ9UHG2 260 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 LUC7L2Q9Y383 392 aaKnown RBP15.95■□□□□ 0.14
HDAC4-213ENST00000496347 DSPP15924 2871 aaKnown RBP15.95■□□□□ 0.14
HDAC4-213ENST00000496347 PLXNB3Q9ULL4 1909 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 ARHGAP42A6NI28 874 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 PRAMEF11O60813 436 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 ATXN1LP0C7T5 689 aaKnown RBP15.94■□□□□ 0.14
HDAC4-213ENST00000496347 THEGLP0DJG4 465 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 ABL2P42684 1182 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 HCAR3P49019 387 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 SUOXP51687 545 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 DPYSQ14117 519 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 PIGHQ14442 188 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-213ENST00000496347 DPYSL2Q16555 572 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 CA9Q16790 459 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 PPP6R3Q5H9R7 873 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-213ENST00000496347 AFMIDQ63HM1 303 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 GDPD4Q6W3E5 623 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 GCNT7Q6ZNI0 430 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 SLCO6A1Q86UG4 719 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 GATAD2AQ86YP4 633 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 NIPA2Q8N8Q9 360 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 IFT43Q96FT9 208 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 KCTD15Q96SI1 283 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-213ENST00000496347 MYOCQ99972 504 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.94■□□□□ 0.14
HDAC4-213ENST00000496347 KLC2Q9H0B6 622 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 FZD3Q9NPG1 666 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 MYO1AQ9UBC5 1043 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 LHX3Q9UBR4 397 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 CA5BQ9Y2D0 317 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 PCDHGA1Q9Y5H4 931 aa15.94■□□□□ 0.14
HDAC4-213ENST00000496347 NEMP1O14524 444 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 AREL1O15033 823 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 SPINT1O43278 529 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 DAPK3O43293 454 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 CDK4P11802 303 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 GKP32189 559 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 TRIM14Q14142 442 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 PRAMEF14Q5SWL7 426 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 KANSL1Q7Z3B3 1105 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 PTAR1Q7Z6K3 402 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-213ENST00000496347 DCP2Q8IU60 420 aaKnown RBP15.93■□□□□ 0.14
HDAC4-213ENST00000496347 NPWQ8N729 165 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 PNPLA1Q8N8W4 532 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 ASB12Q8WXK4 309 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 KLK6Q92876 244 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 SLC17A9Q9BYT1 436 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 CPEB1Q9BZB8 566 aaKnown RBP15.93■□□□□ 0.14
HDAC4-213ENST00000496347 KLHL11Q9NVR0 708 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC4-213ENST00000496347 LRRK1Q38SD2 2015 aa15.93■□□□□ 0.14
HDAC4-213ENST00000496347 TDRD6O60522 2096 aaKnown RBP15.93■□□□□ 0.14
HDAC4-213ENST00000496347 TSPAN11A1L157 253 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 H3BRJ5 948 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 ERCC2P18074 760 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 HNRNPH3P31942 346 aaKnown RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 ARL4AP40617 200 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 RABIFP47224 123 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 SGCGQ13326 291 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 FGL2Q14314 439 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 RFTN1Q14699 578 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 ARHGAP12Q8IWW6 846 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 SLC22A18ASQ8N1D0 253 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 GALNT15Q8N3T1 639 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 LZTR1Q8N653 840 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 OR13H1Q8NG92 308 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 HCAR2Q8TDS4 363 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 TEKT4Q8WW24 435 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 ZCCHC14Q8WYQ9 949 aaKnown RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 CELF6Q96J87 481 aaKnown RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 CNDP2Q96KP4 475 aaKnown RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 KLHL32Q96NJ5 620 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 LENG8Q96PV6 779 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 TUBGCP5Q96RT8 1024 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 C1QTNF7Q9BXJ2 289 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 C1QTNF2Q9BXJ5 285 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 CALN1Q9BXU9 219 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 THAP2Q9H0W7 228 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms