RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 MORF4L2Q15014 288 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ELF2Q15723 593 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ACCSLQ4AC99 568 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 FNDC3BQ53EP0 1204 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 C22orf39Q6P5X5 142 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 PPP1R21Q6ZMI0 780 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 PRUNE1Q86TP1 453 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 HOOK3Q86VS8 718 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 PHTF2Q8N3S3 785 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 TAB3Q8N5C8 712 aaPredicted RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 SH2D3CQ8N5H7 860 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 PCDH20Q8N6Y1 951 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 KDM1BQ8NB78 822 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ISG20Q96AZ6 181 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 FCRL5Q96RD9 977 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 SLC25A51Q9H1U9 297 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ANKZF1Q9H8Y5 726 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 SCUBE2Q9NQ36 999 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 EIF2B3Q9NR50 452 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 HEBP1Q9NRV9 189 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 MTRF1LQ9UGC7 380 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ANAPC5Q9UJX4 755 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ANGPTL2Q9UKU9 493 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 FCF1Q9Y324 198 aaKnown RBP15.2■□□□□ 0.02
GAPDH-210ENST00000496049 SNX24Q9Y343 169 aa15.2■□□□□ 0.02
GAPDH-210ENST00000496049 ESYT3A0FGR9 886 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 MAN2B1O00754 1011 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 NPC1O15118 1278 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 TRIM24O15164 1050 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 CTIFO43310 598 aaKnown RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 NARSO43776 548 aaKnown RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 ZIC2O95409 532 aaPredicted RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 APRTP07741 180 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 SRCP12931 536 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 TPSB2P20231 275 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 DRD1P21728 446 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 TNFRSF8P28908 595 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 CTSOP43234 321 aaPredicted RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 TNFRSF4P43489 277 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 AP1S1P61966 158 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 SNRPD1P62314 119 aaKnown RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 TPSAB1Q15661 275 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 SLC14A2Q15849 920 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 CEP128Q6ZU80 1094 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 CNTD1Q8N815 330 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 CYB5D2Q8WUJ1 264 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 IFT81Q8WYA0 676 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 SEC14L1Q92503 715 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 CHFRQ96EP1 664 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 RPL10LQ96L21 214 aaKnown RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 FSD1LQ9BXM9 530 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 LRRC40Q9H9A6 602 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 TBC1D17Q9HA65 648 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 GDF3Q9NR23 364 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 VPS45Q9NRW7 570 aa15.19■□□□□ 0.02
GAPDH-210ENST00000496049 FARP1Q9Y4F1 1045 aaPredicted RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 MUC22E2RYF6 1773 aaPredicted RBP15.19■□□□□ 0.02
GAPDH-210ENST00000496049 RALGAPA1Q6GYQ0 2036 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 KRBA1A5PL33 1030 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 F5H423 210 aaPredicted RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 ATP9BO43861 1147 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 METTL18O95568 372 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 GSRP00390 522 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 SERPINF2P08697 491 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 CD68P34810 354 aaPredicted RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 ITGA8P53708 1063 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TERF1P54274 439 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 MAXP61244 160 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 CDK16Q00536 496 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 RAD51Q06609 339 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 NSUN2Q08J23 767 aaKnown RBP eCLIP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 MPP3Q13368 585 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 CYTH1Q15438 398 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 MLF2Q15773 248 aaPredicted RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 MAP9Q49MG5 647 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 FAXCQ5TGI0 409 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TMEM215Q68D42 235 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 ALG1LQ6GMV1 187 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 WDR93Q6P2C0 686 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TPRG1Q6ZUI0 275 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TRMT11Q7Z4G4 463 aaKnown RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 C1orf210Q8IVY1 113 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 RYBPQ8N488 228 aaPredicted RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TSEN2Q8NCE0 465 aaKnown RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.18■□□□□ 0.024e-10■■■□□ 19.2
GAPDH-210ENST00000496049 IMP4Q96G21 291 aaKnown RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 EXOC2Q96KP1 924 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 SEMA3CQ99985 751 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 FRMD8Q9BZ67 464 aaPredicted RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TM6SF2Q9BZW4 377 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 ETNK1Q9HBU6 452 aa15.18■□□□□ 0.02
GAPDH-210ENST00000496049 ASH1LQ9NR48 2969 aaKnown RBP15.18■□□□□ 0.02
GAPDH-210ENST00000496049 LHX3Q9UBR4 397 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms