RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TBC1D3KA0A087X1G2 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3FA6NER0 549 aaPredicted RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 A8MX80 341 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3LB9A6J9 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 H7C0C1 242 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 MATN3O15232 486 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 FSBPO95073 299 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 POP4O95707 220 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 SEMA4FO95754 770 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 LMNAP02545 664 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3HP0C7X1 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TGM2P21980 687 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ITPKAP23677 461 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 CCNCP24863 283 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 CNR2P34972 360 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ATP5OP48047 213 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ADPRHP54922 357 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 DSC2Q02487 901 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PPIDQ08752 370 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 PDK1Q15118 436 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ELF2Q15723 593 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 AGBL4Q5VU57 503 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 FAM46CQ5VWP2 391 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3GQ6DHY5 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3CQ6IPX1 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 BBS12Q6ZW61 710 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PARS2Q7L3T8 475 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 LPCAT2Q7L5N7 544 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 VSIG1Q86XK7 387 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 RGL4Q8IZJ4 473 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3Q8IZP1 549 aaPredicted RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 CASKIN2Q8WXE0 1202 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 KLK6Q92876 244 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PSKH2Q96QS6 385 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 SCUBE2Q9NQ36 999 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 R3HDM2Q9Y2K5 976 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 PPP1R12AO14974 1030 aaPredicted RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 ATP1A1P05023 1023 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 PPP2CBP62714 309 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PPP2CAP67775 309 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ZBTB16Q05516 673 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ZNF33AQ06730 810 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PTPRRQ15256 657 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PIP5KL1Q5T9C9 394 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 PMS2CLQ68D20 193 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TIGD7Q6NT04 549 aaPredicted RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 FBXL19Q6PCT2 694 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 GDPD4Q6W3E5 623 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 KDELC2Q7Z4H8 507 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 SRLQ86TD4 932 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ZSWIM9Q86XI8 627 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TMIEQ8NEW7 156 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TFB1MQ8WVM0 346 aaKnown RBP11.26□□□□□ -0.61
APTX-230ENST00000494649 PIGKQ92643 395 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 MYOCQ99972 504 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 SEMA3CQ99985 751 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 ARRDC1-AS1Q9H2J1 176 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 FSCN3Q9NQT6 498 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TMEM74BQ9NUR3 256 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 A0A0U1RQS6 177 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 C16orf96A6NNT2 1141 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 MEI4A8MW99 385 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 PATE3B3GLJ2 98 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 APOC4-APOC2K7ER74 178 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 ALOX15BO15296 676 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 TJP3O95049 919 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 APOC2P02655 101 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 RBL1P28749 1068 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 CETN2P41208 172 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 ABL2P42684 1182 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 RENBPP51606 427 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 TAS2R38P59533 333 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 COPS2P61201 443 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 RAD51Q06609 339 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 BYSLQ13895 437 aaKnown RBP11.25□□□□□ -0.61
APTX-230ENST00000494649 HNRNPDQ14103 355 aaKnown RBP11.25□□□□□ -0.61
APTX-230ENST00000494649 IHHQ14623 411 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 RFTN1Q14699 578 aaPredicted RBP11.25□□□□□ -0.61
APTX-230ENST00000494649 ZNF805Q5CZA5 627 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 CFAP58Q5T655 872 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 TCEAL6Q6IPX3 200 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 LAYNQ6UX15 382 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 ERN2Q76MJ5 926 aaKnown RBP11.25□□□□□ -0.61
APTX-230ENST00000494649 TTC7BQ86TV6 843 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
APTX-230ENST00000494649 BBS5Q8N3I7 341 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 CNTD1Q8N815 330 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 TCEAL3Q969E4 200 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 ZNF599Q96NL3 588 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 SMIM14Q96QK8 99 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 SMARCAL1Q9NZC9 954 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 UBP1Q9NZI7 540 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 NCDNQ9UBB6 729 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 SPAG17Q6Q759 2223 aa11.25□□□□□ -0.61
APTX-230ENST00000494649 KIF5CO60282 957 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 CEP104O60308 925 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms