RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ANKRD52Q8NB46 1076 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 SLC44A5Q8NCS7 719 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 NFKBIDQ8NI38 313 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 METTL6Q8TCB7 284 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 NOC3LQ8WTT2 800 aaKnown RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 TMEM174Q8WUU8 243 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 POLDIP3Q9BY77 421 aaKnown RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 WDR6Q9NNW5 1121 aaKnown RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 PNRC2Q9NPJ4 139 aaKnown RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 KRT84Q9NSB2 600 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 HCN3Q9P1Z3 774 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 HSPB7Q9UBY9 170 aa4.7□□□□□ -1.66
SMC4-224ENST00000494612 TTBK1Q5TCY1 1321 aaPredicted RBP4.7□□□□□ -1.66
SMC4-224ENST00000494612 SCRIBQ14160 1630 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 TYW5A2RUC4 315 aaKnown RBP4.69□□□□□ -1.66
SMC4-224ENST00000494612 GAGE10A6NGK3 116 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 ZNF814B7Z6K7 855 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 HSPB6O14558 160 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 LDLRAD4O15165 306 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 SEC31AO94979 1220 aaKnown RBP4.69□□□□□ -1.66
SMC4-224ENST00000494612 CAPN3P20807 821 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 YWHAQP27348 245 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 POU1F1P28069 291 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 EFNA5P52803 228 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 CYP4A11Q02928 519 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 SRSF1Q07955 248 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMC4-224ENST00000494612 PKP1Q13835 747 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 CAPSQ13938 189 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 RUNX2Q13950 521 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 VEPH1Q14D04 833 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 TAF11Q15544 211 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 LRRC8EQ6NSJ5 796 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 RRM2BQ7LG56 351 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 KDELC2Q7Z4H8 507 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 KIAA2013Q8IYS2 634 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 CEP76Q8TAP6 659 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 KLHL29Q96CT2 875 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 MSI2Q96DH6 328 aaKnown RBP4.69□□□□□ -1.66
SMC4-224ENST00000494612 C20orf141Q9NUB4 165 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 PPP1R14DQ9NXH3 145 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 MAP3K20Q9NYL2 800 aaKnown RBP4.69□□□□□ -1.66
SMC4-224ENST00000494612 TAS2R10Q9NYW0 307 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 HEY2Q9UBP5 337 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 ADGRF5Q8IZF2 1346 aa4.69□□□□□ -1.66
SMC4-224ENST00000494612 A0A0G2JK05 382 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 TMEM272A0A1B0GTI8 110 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 STMND1H3BQB6 276 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 TGFB1I1O43294 461 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 TNFSF14O43557 240 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 ATP2C2O75185 946 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 NDUFB8O95169 186 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 UNGP13051 313 aaPredicted RBP4.68□□□□□ -1.66
SMC4-224ENST00000494612 ICAM3P32942 547 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 ABCD1P33897 745 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 POLD2P49005 469 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 SLC18A2Q05940 514 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 SLC45A4Q5BKX6 768 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 TMEM71Q6P5X7 295 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 DSTYKQ6XUX3 929 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 SERPINA11Q86U17 422 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 TDRPQ86YL5 185 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 CADM3Q8N126 398 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 ZBTB8BQ8NAP8 495 aaPredicted RBP4.68□□□□□ -1.66
SMC4-224ENST00000494612 ZNF548Q8NEK5 533 aaPredicted RBP4.68□□□□□ -1.66
SMC4-224ENST00000494612 OR4N2Q8NGD1 307 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 HDAC7Q8WUI4 952 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 CENPIQ92674 756 aaPredicted RBP4.68□□□□□ -1.66
SMC4-224ENST00000494612 CLMNQ96JQ2 1002 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 C7orf26Q96N11 449 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 PIP5K1AQ99755 562 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 CHCHD6Q9BRQ6 235 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 B3GNT4Q9C0J1 378 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 BLOC1S4Q9NUP1 217 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 KIAA1456Q9P272 454 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 CLDN16Q9Y5I7 305 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 PIAS3Q9Y6X2 628 aa4.68□□□□□ -1.66
SMC4-224ENST00000494612 ZNF335Q9H4Z2 1342 aaPredicted RBP4.68□□□□□ -1.66
SMC4-224ENST00000494612 USO1O60763 962 aaKnown RBP4.67□□□□□ -1.66
SMC4-224ENST00000494612 ZC3H11AO75152 810 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMC4-224ENST00000494612 OAZ2O95190 189 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 PPP3CCP48454 512 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 THBS3P49746 956 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 RPS3AP61247 264 aaKnown RBP4.67□□□□□ -1.66
SMC4-224ENST00000494612 PPP2R5BQ15173 497 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 INPP5JQ15735 1006 aaPredicted RBP4.67□□□□□ -1.66
SMC4-224ENST00000494612 SERTAD4-AS1Q5TG53 156 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 DLK2Q6UY11 383 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 FAM185AQ8N0U4 392 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 TMEM199Q8N511 208 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 CADM4Q8NFZ8 388 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 SAAL1Q96ER3 474 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 BBS4Q96RK4 519 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 YME1L1Q96TA2 773 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 WDR83Q9BRX9 315 aaKnown RBP4.67□□□□□ -1.66
SMC4-224ENST00000494612 TMX4Q9H1E5 349 aaPredicted RBP4.67□□□□□ -1.66
SMC4-224ENST00000494612 TBC1D14Q9P2M4 693 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 FBXO40Q9UH90 709 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 MKLN1Q9UL63 735 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 PSAT1Q9Y617 370 aa4.67□□□□□ -1.66
SMC4-224ENST00000494612 ZMYM2Q9UBW7 1377 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms