RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 OMDQ99983 421 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 RERGLQ9H628 205 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 INVSQ9Y283 1065 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 MTF2Q9Y483 593 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-207ENST00000494090 TMEM191CA6NGB0 347 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 KPNA4O00629 521 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-207ENST00000494090 VAV1P15498 845 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 HJURPQ8NCD3 748 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-207ENST00000494090 PCDHB18PQ96TA0 734 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 DCUN1D5Q9BTE7 237 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 FAIM2Q9BWQ8 316 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 PRDM12Q9H4Q4 367 aa19.33■□□□□ 0.68
COL27A1-207ENST00000494090 KCNH1O95259 989 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 EVX2Q03828 476 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 TATDN1Q6P1N9 297 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 DOK6Q6PKX4 331 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 POP5Q969H6 163 aaKnown RBP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 MRPL57Q9BQC6 102 aaKnown RBP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 TCRBV9S1A1TA0A576 114 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 ANPEPP15144 967 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 MAP2K5Q13163 448 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 UGCGQ16739 394 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 INSCQ1MX18 579 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 PIWIL4Q7Z3Z4 852 aaKnown RBP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 DHDDSQ86SQ9 333 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 AADATQ8N5Z0 425 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 DAPK2Q9UIK4 370 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 FAM25AB3EWG3 89 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 FAM25CB3EWG5 89 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 FAM25GB3EWG6 89 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 HDAC3O15379 428 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 RAB10P61026 200 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 C11orf88Q6PI97 169 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 ZNF276Q8N554 614 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 TPD52L3Q96J77 140 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 LHX5Q9H2C1 402 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 RIBC2Q9H4K1 309 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 BTBD7Q9P203 1132 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 GIT1Q9Y2X7 761 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 ENTPD5O75356 428 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 ADH1AP07327 375 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 COX7A2P14406 83 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 PSME3P61289 254 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 PEX6Q13608 980 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 DNAJC14Q6Y2X3 702 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 DIABLOQ9NR28 239 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 FBXO6Q9NRD1 293 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 KRT36O76013 467 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 MLYCDO95822 493 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 TTKP33981 857 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 FLT3P36888 993 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 CD86P42081 329 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 DGUOKQ16854 277 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 ADHFE1Q8IWW8 467 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 HELQQ8TDG4 1101 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 KREMEN1Q96MU8 473 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL27A1-207ENST00000494090 FAM50BQ9Y247 325 aa19.32■□□□□ 0.68
COL27A1-207ENST00000494090 LINC00854A0A1B0GVQ3 168 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 TRIM38O00635 465 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 OR6A2O95222 327 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 GOT1P17174 413 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ZNHIT3Q15649 155 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 USP41Q3LFD5 358 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 FGD3Q5JSP0 725 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 BNIPLQ7Z465 357 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 PTGR2Q8N8N7 351 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ACE2Q9BYF1 805 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 SLCO1B3Q9NPD5 702 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 NFKBIL1Q9UBC1 381 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 STX11O75558 287 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 HDCP19113 662 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 PPP1R15BQ5SWA1 713 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 MFSD5Q6N075 450 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ZNF621Q6ZSS3 439 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 SPAG4Q9NPE6 437 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 SESN1Q9Y6P5 492 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 MAGEC1O60732 1142 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 MED26O95402 600 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 SNHG28P0DPA3 235 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 BHLHB9Q6PI77 547 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 LRRC52Q8N7C0 313 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 COPS5Q92905 334 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 PURBQ96QR8 312 aaKnown RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 EFR3BQ9Y2G0 817 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ARIH1Q9Y4X5 557 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-207ENST00000494090 H3BN98 237 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 FTH1P02794 183 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 AIF1P55008 147 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 STX4Q12846 297 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 B3GNT6Q6ZMB0 384 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 FBXW8Q8N3Y1 598 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ASB8Q9H765 288 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 NEK6Q9HC98 313 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 ZNF232Q9UNY5 417 aa19.31■□□□□ 0.68
COL27A1-207ENST00000494090 H7C0S8 307 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms