RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NFKB1P19838 968 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 LMO2P25791 158 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 TKTP29401 623 aaKnown RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 RPL5P46777 297 aaKnown RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 ACADVLP49748 655 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 PSEN2P49810 448 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 ATXN1P54253 815 aaKnown RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 BTG3Q14201 252 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 ADGRE1Q14246 886 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 GRAMD1BQ3KR37 738 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 PIGGQ5H8A4 983 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 GLRA4Q5JXX5 417 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 BORAQ6PGQ7 559 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 ANKRD33Q7Z3H0 272 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 CMC1Q7Z7K0 106 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 UCMAQ8WVF2 138 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 LZICQ8WZA0 190 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 AZIN2Q96A70 460 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 LENG1Q96BZ8 264 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 DUS3LQ96G46 650 aaKnown RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 SCYL1Q96KG9 808 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 SENP8Q96LD8 212 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 CYP2S1Q96SQ9 504 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 IL12RB2Q99665 862 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 GDF15Q99988 308 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 LBHD1Q9BQE6 289 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 SLC25A23Q9BV35 468 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 FSD1LQ9BXM9 530 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 PRO3102Q9H379 93 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 POPDC3Q9HBV1 291 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 IARS2Q9NSE4 1012 aaKnown RBP11.62□□□□□ -0.55
RFC4-214ENST00000494047 ARHGEF38Q9NXL2 777 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 SLC39A10Q9ULF5 831 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 ATP11BQ9Y2G3 1177 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 TCAF1Q9Y4C2 921 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 SQORQ9Y6N5 450 aa11.62□□□□□ -0.55
RFC4-214ENST00000494047 MEI4A8MW99 385 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 E9PBE3 544 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 KCNK1O00180 336 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 SPTLC1O15269 473 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 KLHL41O60662 606 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 PIGNO95427 931 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CAPNS1P04632 268 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CYP11A1P05108 521 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 C7P10643 843 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 HOXC8P31273 242 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CCR1P32246 355 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 INHBCP55103 352 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 MAP3K7CLP57077 242 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CRADDP78560 199 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 NFKB2Q00653 900 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CREB5Q02930 508 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 PDK3Q15120 406 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 TRIM60Q495X7 471 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 UBXN11Q5T124 520 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 NAIF1Q69YI7 327 aaPredicted RBP11.61□□□□□ -0.55
RFC4-214ENST00000494047 EFL1Q7Z2Z2 1120 aaKnown RBP11.61□□□□□ -0.55
RFC4-214ENST00000494047 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 DSELQ8IZU8 1212 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 THEM5Q8N1Q8 247 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 C2CD4AQ8NCU7 369 aaPredicted RBP11.61□□□□□ -0.55
RFC4-214ENST00000494047 PYDC1Q8WXC3 89 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 PBXIP1Q96AQ6 731 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 ROPN1LQ96C74 230 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CLPTM1LQ96KA5 538 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 FCRL3Q96P31 734 aaPredicted RBP11.61□□□□□ -0.55
RFC4-214ENST00000494047 LENG8Q96PV6 779 aaPredicted RBP11.61□□□□□ -0.55
RFC4-214ENST00000494047 C1QTNF1Q9BXJ1 281 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 ZNF696Q9H7X3 374 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 CYP4F11Q9HBI6 524 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 ARNT2Q9HBZ2 717 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 GLOD4Q9HC38 313 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 SLC24A3Q9HC58 644 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 PTTG2Q9NZH5 202 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 SARDHQ9UL12 918 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 RIMKLBQ9ULI2 386 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 TMCO1Q9UM00 188 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 MAGED2Q9UNF1 606 aaPredicted RBP11.61□□□□□ -0.55
RFC4-214ENST00000494047 GINS2Q9Y248 185 aa11.61□□□□□ -0.55
RFC4-214ENST00000494047 FAM95CA0A1B0GW59 222 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 MYADML2A6NDP7 307 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 ARVCFO00192 962 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 VPS4BO75351 444 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 LRIG2O94898 1065 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 IGLV3-25P01717 112 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 CLTBP09497 229 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SLC35E2BP0CK96 405 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 CD68P34810 354 aaPredicted RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 STX1BP61266 288 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 TSPY1Q01534 308 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 TLE2Q04725 743 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 TNK2Q07912 1038 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 ACAP2Q15057 778 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SLC14A2Q15849 920 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 USP41Q3LFD5 358 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms