RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 USP27XA6NNY8 438 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 KCNK1O00180 336 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 MATN3O15232 486 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 GJB3O75712 270 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 TJP3O95049 919 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 HLA-DQB2P05538 268 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 CCNB1P14635 433 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 SCNN1BP51168 640 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 NEK3P51956 506 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 AP1S1P61966 158 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 ITKQ08881 620 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 HNRNPDQ14103 355 aaKnown RBP10.24□□□□□ -0.77
RFC2-211ENST00000494019 GRM3Q14832 879 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 NOMO1Q15155 1222 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 ZNF805Q5CZA5 627 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 CFAP58Q5T655 872 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 LYSMD4Q5XG99 296 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 LAIR1Q6GTX8 287 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 GDPD4Q6W3E5 623 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 ERN2Q76MJ5 926 aaKnown RBP10.24□□□□□ -0.77
RFC2-211ENST00000494019 PARS2Q7L3T8 475 aaKnown RBP10.24□□□□□ -0.77
RFC2-211ENST00000494019 SRLQ86TD4 932 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 TEX26Q8N6G2 289 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 PAF1Q8N7H5 531 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 OR14C36Q8NHC7 312 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 TFB1MQ8WVM0 346 aaKnown RBP10.24□□□□□ -0.77
RFC2-211ENST00000494019 SNX19Q92543 992 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 MAML1Q92585 1016 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 FATE1Q969F0 183 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 KLHL32Q96NJ5 620 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 TUBGCP5Q96RT8 1024 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 MGME1Q9BQP7 344 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 CEP41Q9BYV8 373 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 POLR1EQ9GZS1 481 aaKnown RBP10.24□□□□□ -0.77
RFC2-211ENST00000494019 SGK2Q9HBY8 427 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 HAUS2Q9NVX0 235 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 EFR3BQ9Y2G0 817 aa10.24□□□□□ -0.77
RFC2-211ENST00000494019 MYLKQ15746 1914 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 SCN8AQ9UQD0 1980 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 TTC24A2A3L6 582 aaPredicted RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 GOLGA6L9A6NEM1 432 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 LRRC72A6NJI9 287 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 KCNK3O14649 394 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 ENC1O14682 589 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 SLC7A4O43246 635 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 PLRG1O43660 514 aaKnown RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 KIF5CO60282 957 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 EPN2O95208 641 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 ADRB3P13945 408 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CR2P20023 1033 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 SERPINA4P29622 427 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 PLA2G5P39877 138 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 PTGER3P43115 390 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 MAPK8P45983 427 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CSNK1DP48730 415 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 IFI35P80217 286 aaPredicted RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 OTUD4Q01804 1114 aaKnown RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 DSC2Q02487 901 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CREB5Q02930 508 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 ZNF33AQ06730 810 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 BCL2L1Q07817 233 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 NSUN2Q08J23 767 aaKnown RBP eCLIP10.23□□□□□ -0.77
RFC2-211ENST00000494019 CCDC15Q0P6D6 951 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 ZBTB17Q13105 803 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 PRKD1Q15139 912 aaPredicted RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 ZNF569Q5MCW4 686 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 PIP5KL1Q5T9C9 394 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 FBXL19Q6PCT2 694 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 NCEH1Q6PIU2 408 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 ASCL5Q7RTU5 278 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CYP2U1Q7Z449 544 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CAMK1DQ8IU85 385 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 SLC41A1Q8IVJ1 513 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.23□□□□□ -0.77
RFC2-211ENST00000494019 ACTL9Q8TC94 416 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 UBE2Q2Q8WVN8 375 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 FAM131CQ96AQ9 280 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 VOPP1Q96AW1 172 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 FAM122AQ96E09 287 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 QKIQ96PU8 341 aaKnown RBP eCLIP10.23□□□□□ -0.77
RFC2-211ENST00000494019 NUDCD1Q96RS6 583 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 SEMA3CQ99985 751 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 FAM118BQ9BPY3 351 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CPEB1Q9BZB8 566 aaKnown RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 BRD8Q9H0E9 1235 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 CARD9Q9H257 536 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 C6orf106Q9H6K1 298 aaPredicted RBP10.23□□□□□ -0.77
RFC2-211ENST00000494019 ATP13A3Q9H7F0 1226 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.77
RFC2-211ENST00000494019 SDK1Q7Z5N4 2213 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 PCDH15Q96QU1 1955 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 MYO15AQ9UKN7 3530 aa10.23□□□□□ -0.77
RFC2-211ENST00000494019 TBC1D3DA0A087WVF3 549 aa10.22□□□□□ -0.77
RFC2-211ENST00000494019 TBC1D3IA0A087WXS9 549 aa10.22□□□□□ -0.77
RFC2-211ENST00000494019 TBC1D3EA0A087X179 549 aa10.22□□□□□ -0.77
RFC2-211ENST00000494019 TBC1D3KA0A087X1G2 549 aa10.22□□□□□ -0.77
RFC2-211ENST00000494019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms