RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 YBEYP58557 167 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 ZSWIM9Q86XI8 627 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 FNIP1Q8TF40 1166 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 FUBP1Q96AE4 644 aaKnown RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 KLF6Q99612 283 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 EPAS1Q99814 870 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 DMTF1Q9Y222 760 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 NEUROG3Q9Y4Z2 214 aa12.8□□□□□ -0.36
HSPG2-212ENST00000493940 ANKRD11Q6UB99 2663 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-212ENST00000493940 APC2O95996 2303 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ACACAQ13085 2346 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 BAHCC1Q9P281 2608 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 TTC24A2A3L6 582 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ANKRD62A6NC57 917 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 IGLON5A6NGN9 336 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 PRAMEF26H0Y7S4 382 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 EEF2KO00418 725 aaKnown RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 MUSKO15146 869 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SDC3O75056 442 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 PIGNO95427 931 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 POP4O95707 220 aaKnown RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SERPING1P05155 500 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 CYP1A2P05177 515 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 GIMD1P0DJR0 217 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 AMPD1P23109 780 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ETFBP38117 255 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 RXRGP48443 463 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 TPI1P60174 286 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SEMG2Q02383 582 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 DNAJC3Q13217 504 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 DPYSQ14117 519 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 STAT4Q14765 748 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SMTNL2Q2TAL5 461 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ATP13A4Q4VNC1 1196 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SETMARQ53H47 684 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 INO80DQ53TQ3 878 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ZNF805Q5CZA5 627 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ZNF542PQ5EBM4 170 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 PPP6R3Q5H9R7 873 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 RFX8Q6ZV50 586 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 NYAP1Q6ZVC0 841 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 ZNF354CQ86Y25 554 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SLC25A45Q8N413 288 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 EID2Q8N6I1 236 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 PACSIN1Q9BY11 444 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 SLC17A9Q9BYT1 436 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 CATSPERBQ9H7T0 1116 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 UCKL1Q9NWZ5 548 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 KLF15Q9UIH9 416 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 PNMA8BQ9ULN7 279 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-212ENST00000493940 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
HSPG2-212ENST00000493940 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 TAF4O00268 1085 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 AREL1O15033 823 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 AP1G1O43747 822 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 THEGLP0DJG4 465 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 RARAP10276 462 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 IL4RP24394 825 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 EPHA8P29322 1005 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 SNRPD1P62314 119 aaKnown RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 HNRNPDQ14103 355 aaKnown RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 PARP15Q460N3 678 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 FAM182AQ5T1J6 154 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 ALKBH5Q6P6C2 394 aaKnown RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 GDPD4Q6W3E5 623 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 ABI3BPQ7Z7G0 1075 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 IQCHQ86VS3 1027 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 TSEN2Q8NCE0 465 aaKnown RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 ZWILCHQ9H900 591 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 DYRK4Q9NR20 520 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 GPR27Q9NS67 375 aa12.78□□□□□ -0.36
HSPG2-212ENST00000493940 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
HSPG2-212ENST00000493940 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 TRIM38O00635 465 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 FGF10O15520 208 aaPredicted RBP12.77□□□□□ -0.37
HSPG2-212ENST00000493940 PRPSAP2O60256 369 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 MMP20O60882 483 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 RNF8O76064 485 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 PEX11BO96011 259 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 PRKCGP05129 697 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 CD48P09326 243 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 MYF5P13349 255 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 HNRNPA2B1P22626 353 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms