RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 FDPSP14324 419 aaKnown RBP4.85□□□□□ -1.63
VPS13A-212ENST00000493341 TMEM11P17152 192 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 LAG3P18627 525 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 TNFRSF1AP19438 455 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 EEFSECP57772 596 aaKnown RBP4.85□□□□□ -1.63
VPS13A-212ENST00000493341 TOB2Q14106 344 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-212ENST00000493341 NAB2Q15742 525 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 HIST2H2ACQ16777 129 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-212ENST00000493341 TXNRD1Q16881 649 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 LETM2Q2VYF4 491 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 GLE1Q53GS7 698 aaKnown RBP4.85□□□□□ -1.63
VPS13A-212ENST00000493341 PLBD1Q6P4A8 553 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 NAT8LQ8N9F0 302 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 EXD3Q8N9H8 876 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 KIF18AQ8NI77 898 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 CCDC34Q96HJ3 373 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 KAZALD1Q96I82 304 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 RAB3IPQ96QF0 476 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-212ENST00000493341 SLC38A3Q99624 504 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 AIFM2Q9BRQ8 373 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 KIFC3Q9BVG8 833 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 PDZD7Q9H5P4 517 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 TFCP2L1Q9NZI6 479 aa4.85□□□□□ -1.63
VPS13A-212ENST00000493341 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 SEC14L5O43304 696 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 EXOC3O60645 756 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 AVILO75366 819 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 TADA2AO75478 443 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 FARP2O94887 1054 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 GOSR1O95249 250 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 C6P13671 934 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 APEHP13798 732 aaKnown RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 MCM7P33993 719 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 TMF1P82094 1093 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 UBXN1Q04323 297 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 FZD5Q13467 585 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 SEMA3AQ14563 771 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 KCNB1Q14721 858 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 DRAP1Q14919 205 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 PTPRRQ15256 657 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ME3Q16798 604 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 C5orf22Q49AR2 442 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 CXorf66Q5JRM2 361 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 XP32Q5T750 250 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 TMEM268Q5VZI3 342 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ZNF551Q7Z340 670 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 WDR53Q7Z5U6 358 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 AACSQ86V21 672 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 UNC45BQ8IWX7 931 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 DHX40Q8IX18 779 aaKnown RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ZNF276Q8N554 614 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 Q8TCH9 128 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 CELF1Q92879 486 aaKnown RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 FUBP1Q96AE4 644 aaKnown RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ARHGEF26Q96DR7 871 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ADOQ96SZ5 270 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 CIPCQ9C0C6 399 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 TXNRD2Q9NNW7 524 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 WSB2Q9NYS7 404 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ABI3Q9P2A4 366 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 ANAPC2Q9UJX6 822 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 FAM96BQ9Y3D0 163 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-212ENST00000493341 AOX1Q06278 1338 aa4.84□□□□□ -1.63
VPS13A-212ENST00000493341 TRAV34A0A0B4J273 112 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 FAM237AA0A1B0GTK4 181 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TRBC2A0A5B9 178 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 ARHGEF37A1IGU5 675 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 PATE3B3GLJ2 98 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 H0YIZ8 118 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TJP3O95049 919 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 C22orf31O95567 290 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TSPAN15O95858 294 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TFP02787 698 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 HNRNPCP07910 306 aaKnown RBP eCLIP4.84□□□□□ -1.64
VPS13A-212ENST00000493341 CYP2D6P10635 497 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TAL1P17542 331 aaPredicted RBP4.84□□□□□ -1.64
VPS13A-212ENST00000493341 PON1P27169 355 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 PCSK6P29122 969 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 CDAP32320 146 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 HNF4AP41235 474 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 MRPS5P82675 430 aaKnown RBP4.84□□□□□ -1.64
VPS13A-212ENST00000493341 RHAGQ02094 409 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 AP1B1Q10567 949 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 ALCAMQ13740 583 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 NFE2L1Q14494 772 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 PCID2Q5JVF3 399 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 MCTP1Q6DN14 999 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TMEM65Q6PI78 240 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 SUSD1Q6UWL2 747 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 GLRX5Q86SX6 157 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 EPHX4Q8IUS5 362 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 MINDY1Q8N5J2 469 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 TMEM217Q8N7C4 229 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 MCUQ8NE86 351 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 RASSF8Q8NHQ8 419 aa4.84□□□□□ -1.64
VPS13A-212ENST00000493341 SETD6Q8TBK2 473 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms