RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.322e-8■□□□□ 8.6
RER1-208ENST00000493207 FZD4Q9ULV1 537 aa17.07■□□□□ 0.32
RER1-208ENST00000493207 SMG5Q9UPR3 1016 aaKnown RBP17.07■□□□□ 0.32
RER1-208ENST00000493207 TTLL3Q9Y4R7 772 aa17.07■□□□□ 0.32
RER1-208ENST00000493207 SPAG17Q6Q759 2223 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 TCRBV7S2A1N4TA0A589 114 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 H7C0C1 242 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 JCHAINP01591 159 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 HLA-DQB2P05538 268 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 ITGB7P26010 798 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 ATP5OP48047 213 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 IFI35P80217 286 aaPredicted RBP17.06■□□□□ 0.32
RER1-208ENST00000493207 ZBTB17Q13105 803 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 KLF1Q13351 362 aaPredicted RBP17.06■□□□□ 0.32
RER1-208ENST00000493207 ELF2Q15723 593 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 ZNF805Q5CZA5 627 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 PMS2CLQ68D20 193 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 LPCAT2Q7L5N7 544 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.06■□□□□ 0.32
RER1-208ENST00000493207 OR14C36Q8NHC7 312 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 ZC3H10Q96K80 434 aaKnown RBP17.06■□□□□ 0.32
RER1-208ENST00000493207 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 QKIQ96PU8 341 aaKnown RBP eCLIP17.06■□□□□ 0.32
RER1-208ENST00000493207 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 GPR174Q9BXC1 333 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 CEP41Q9BYV8 373 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 SGK2Q9HBY8 427 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 SCUBE2Q9NQ36 999 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 RAB23Q9ULC3 237 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 ABCA7Q8IZY2 2146 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
RER1-208ENST00000493207 TNRC6BQ9UPQ9 1833 aaKnown RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 NUMA1Q14980 2115 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 HACD1B0YJ81 288 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 RHOBTB1O94844 696 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 SEMA4FO95754 770 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 CXCR5P32302 372 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 ADPRHP54922 357 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 AP1S1P61966 158 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 XRCC4Q13426 336 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 GRM3Q14832 879 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 PIP5KL1Q5T9C9 394 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 AGBL4Q5VU57 503 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 ERN2Q76MJ5 926 aaKnown RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 PARS2Q7L3T8 475 aaKnown RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 CAMK1DQ8IU85 385 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 C17orf53Q8N3J3 647 aaPredicted RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 SUMF1Q8NBK3 374 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 NKD2Q969F2 451 aaPredicted RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 TUBGCP5Q96RT8 1024 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 IL12RB2Q99665 862 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 HDAC8Q9BY41 377 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
RER1-208ENST00000493207 SEMA4AQ9H3S1 761 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 ATP13A3Q9H7F0 1226 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 C10orf88Q9H8K7 445 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 NOD2Q9HC29 1040 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 HAUS2Q9NVX0 235 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 AMACRQ9UHK6 382 aa17.05■□□□□ 0.32
RER1-208ENST00000493207 FAM47DPA6NHR8 397 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 C16orf96A6NNT2 1141 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 LMNAP02545 664 aaKnown RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 ATP1A1P05023 1023 aaKnown RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 ADRB3P13945 408 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 CR2P20023 1033 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 SERPINA4P29622 427 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 MAPK8P45983 427 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 DHPSP49366 369 aaPredicted RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 NEK3P51956 506 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 DSC2Q02487 901 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 BCL2L1Q07817 233 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 SLC45A4Q5BKX6 768 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 FBXL19Q6PCT2 694 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 NCEH1Q6PIU2 408 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 ADAT2Q7Z6V5 191 aaKnown RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 SLC13A5Q86YT5 568 aaPredicted RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 FAM131CQ96AQ9 280 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 NSMCE3Q96MG7 304 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 SEMA3CQ99985 751 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 SUV39H2Q9H5I1 410 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 C6orf106Q9H6K1 298 aaPredicted RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 R3HDM2Q9Y2K5 976 aaKnown RBP17.04■□□□□ 0.32
RER1-208ENST00000493207 ATP8A1Q9Y2Q0 1164 aa17.04■□□□□ 0.32
RER1-208ENST00000493207 PRR23AA6NEV1 266 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 LRRC72A6NJI9 287 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 PROB1E7EW31 1015 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 SLC7A4O43246 635 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 PLRG1O43660 514 aaKnown RBP17.03■□□□□ 0.32
RER1-208ENST00000493207 CEP104O60308 925 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 RBP3P10745 1247 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 PTPN3P26045 913 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 RBL1P28749 1068 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 PTGER3P43115 390 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 CCDC15Q0P6D6 951 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 RALGPS1Q5JS13 557 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 LRRC73Q5JTD7 316 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms