RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.34
CLIP2-209ENST00000493166 GVINP1Q7Z2Y8 2422 aa12.96□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3DA0A087WVF3 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3IA0A087WXS9 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3EA0A087X179 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3LB9A6J9 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 INSIG1O15503 277 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PEX11BO96011 259 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PTMAP06454 111 aaKnown RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3HP0C7X1 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 ZNF806P0C7X5 589 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 KRT10P13645 584 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 ADRB3P13945 408 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 GNSP15586 552 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TGM1P22735 817 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 CTNNA2P26232 953 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 MMP13P45452 471 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 RGRP47804 291 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 NSUN2Q08J23 767 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 SLC10A2Q12908 348 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 LLGL1Q15334 1064 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 SF3A2Q15428 464 aaKnown RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TAZQ16635 292 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 MARC1Q5VT66 337 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PEAR1Q5VY43 1037 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3GQ6DHY5 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3CQ6IPX1 549 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 FBXL19Q6PCT2 694 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PRR23CQ6ZRP0 262 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PARS2Q7L3T8 475 aaKnown RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 RABEPKQ7Z6M1 372 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 SRLQ86TD4 932 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 TBC1D3Q8IZP1 549 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 C12orf50Q8NA57 414 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 CCNYQ8ND76 341 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 DNASE2BQ8WZ79 361 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 BIRC7Q96CA5 298 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 KLHL32Q96NJ5 620 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 CPEB1Q9BZB8 566 aaKnown RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PREBQ9HCU5 417 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 SUSD2Q9UGT4 822 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 EIF2B4Q9UI10 523 aaKnown RBP12.95□□□□□ -0.34
CLIP2-209ENST00000493166 GUCA1BQ9UMX6 200 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 PCDHA3Q9Y5H8 950 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 CAPN6Q9Y6Q1 641 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 CACNA1EQ15878 2313 aa12.95□□□□□ -0.34
CLIP2-209ENST00000493166 C16orf96A6NNT2 1141 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 PATE3B3GLJ2 98 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 PPP1R12AO14974 1030 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-209ENST00000493166 KHNYNO15037 678 aaKnown RBP12.94□□□□□ -0.34
CLIP2-209ENST00000493166 MUSKO15146 869 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 MATN3O15232 486 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CST8O60676 142 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 NEBLO76041 1014 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 PIGNO95427 931 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 FTCDO95954 541 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CFIP05156 583 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 IGHV4-34P06331 123 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CCNCP24863 283 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CSNK1DP48730 415 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 SCNN1BP51168 640 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CCR5P51681 352 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 RWDD2BP57060 319 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 TAS2R38P59533 333 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 COPS2P61201 443 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 PPP2CBP62714 309 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 PPP2CAP67775 309 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 PPP2R5EQ16537 467 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 DUOXA1Q1HG43 343 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 AASDHQ4L235 1098 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-209ENST00000493166 TRIM61Q5EBN2 209 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CFAP58Q5T655 872 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 TCEAL6Q6IPX3 200 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 NPNTQ6UXI9 565 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 ZCCHC9Q8N567 271 aaKnown RBP12.94□□□□□ -0.34
CLIP2-209ENST00000493166 UBL4BQ8N7F7 174 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 CEP76Q8TAP6 659 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 TCEAL3Q969E4 200 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 TSGA13Q96PP4 275 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 TUBGCP5Q96RT8 1024 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
CLIP2-209ENST00000493166 ATP13A3Q9H7F0 1226 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 LZTFL1Q9NQ48 299 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 HAUS2Q9NVX0 235 aa12.94□□□□□ -0.34
CLIP2-209ENST00000493166 hCG_1818297A0A087WSY0 165 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 A0A1B0GTW7 788 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 MIF4GDA9UHW6 222 aaKnown RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 GJB3O75712 270 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 TGM2P21980 687 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 XPAP23025 273 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-209ENST00000493166 CD27P26842 260 aa12.93□□□□□ -0.34
CLIP2-209ENST00000493166 SERPINA4P29622 427 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms