RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 DNAJC28Q9NX36 388 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 DONSONQ9NYP3 566 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 SPASTQ9UBP0 616 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 DKK3Q9UBP4 350 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 NOCTQ9UK39 431 aaKnown RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 FHOD1Q9Y613 1164 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 LOC400499M0QZD8 3231 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 CELSR3Q9NYQ7 3312 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 LY6G6EA0A0G2JKS1 128 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 POM121BA6NF01 834 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 C2CD4BA6NLJ0 364 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 GOLGA8SH3BPF8 625 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 RNF103O00237 685 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 AREL1O15033 823 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 FFAR2O15552 330 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 AQP9O43315 295 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 KDELR3O43731 214 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 RAMP2O60895 175 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 PNMA6AP0CW24 399 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-212ENST00000492407 HTR7P34969 479 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 PEX5P50542 639 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 DNA2P51530 1060 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 AIF1P55008 147 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 CLDN6P56747 220 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 YBEYP58557 167 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-212ENST00000492407 RHDQ02161 417 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 FGL2Q14314 439 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 GRM3Q14832 879 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 ISXQ2M1V0 245 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 CCDC14Q49A88 953 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 TCP11X2Q5H9J9 407 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 CCDC181Q5TID7 509 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 TRNP1Q6NT89 227 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 PARS2Q7L3T8 475 aaKnown RBP9.27□□□□□ -0.93
HDAC3-212ENST00000492407 TMC6Q7Z403 805 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 PTAR1Q7Z6K3 402 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-212ENST00000492407 FAM131BQ86XD5 332 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 SPACA3Q8IXA5 215 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 DRC7Q8IY82 874 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 MAPK15Q8TD08 544 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 CPA5Q8WXQ8 436 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 NAT6Q93015 286 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 CENPTQ96BT3 561 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 TBC1D31Q96DN5 1066 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 IL12RB2Q99665 862 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 BOCQ9BWV1 1114 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 CPEB1Q9BZB8 566 aaKnown RBP9.27□□□□□ -0.93
HDAC3-212ENST00000492407 FZD3Q9NPG1 666 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 THSD1Q9NS62 852 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 FCF1Q9Y324 198 aaKnown RBP9.27□□□□□ -0.93
HDAC3-212ENST00000492407 PCDHGA8Q9Y5G5 932 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 RAI2Q9Y5P3 530 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 SNX10Q9Y5X0 201 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 U3KQA8 63 aa9.27□□□□□ -0.93
HDAC3-212ENST00000492407 NYNRINQ9P2P1 1898 aaKnown RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 GOLGA4Q13439 2230 aaKnown RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 IGLON5A6NGN9 336 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 WASH4PA8MWX3 477 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 LMO7DNF2Z398 122 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 TMX2-CTNND1H3BSU7 103 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 NEMP1O14524 444 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 RAD51BO15315 384 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 KIF1CO43896 1103 aaKnown RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 USP12O75317 370 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 CSO75390 466 aaKnown RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 MMEP08473 750 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 PLEKP08567 350 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 KRT3P12035 628 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 JUNDP17535 347 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 BLKP51451 505 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 THOP1P52888 689 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 TMPRSS3P57727 454 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 FOXD4Q12950 439 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 PDE1CQ14123 709 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 AGERQ15109 404 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 NR0B2Q15466 257 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 DPCR1Q3MIW9 517 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 NAA35Q5VZE5 725 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 GDPD4Q6W3E5 623 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 FSTL5Q8N475 847 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 ENOX1Q8TC92 643 aaKnown RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 IFI44Q8TCB0 444 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 RXFP2Q8WXD0 754 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 CRELD1Q96HD1 420 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 GDAP1L1Q96MZ0 367 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 LGMNQ99538 433 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 MYOCQ99972 504 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 TTYH3Q9C0H2 523 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 ZDHHC6Q9H6R6 413 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
HDAC3-212ENST00000492407 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 PCDHB1Q9Y5F3 818 aa9.26□□□□□ -0.93
HDAC3-212ENST00000492407 CFAP69A5D8W1 941 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 SIGLEC16A6NMB1 481 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 EIF3CLB5ME19 914 aaKnown RBP9.25□□□□□ -0.93
HDAC3-212ENST00000492407 KRIT1O00522 736 aa9.25□□□□□ -0.93
HDAC3-212ENST00000492407 TM7SF2O76062 418 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms