RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 MLPHQ9BV36 600 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TBC1D10AQ9BXI6 508 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 SUDS3Q9H7L9 328 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 MRM3Q9HC36 420 aaKnown RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 HDAC3O15379 428 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 CLASP2O75122 1294 aaKnown RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 CST5P28325 142 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 GRIA4P48058 902 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 KCNK10P57789 538 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 RFTN1Q14699 578 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 LYPLAL1Q5VWZ2 237 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 METTL21CQ5VZV1 264 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 RFWD2Q8NHY2 731 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 DTX3LQ8TDB6 740 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 CENPKQ9BS16 269 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 HAUS8Q9BT25 410 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TRMOQ9BU70 441 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 PAPPA2Q9BXP8 1791 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 SLC38A8A6NNN8 435 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 DNM1LO00429 736 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TSPAN3O60637 253 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 MYO1DO94832 1006 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 FGF19O95750 216 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 OR1D2P34982 312 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TTPAP49638 278 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 MLLT6P55198 1093 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 KCNJ2P63252 427 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TPGS2Q68CL5 300 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TRMT10BQ6PF06 316 aaKnown RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 ZYG11AQ6WRX3 759 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 TMEM199Q8N511 208 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 NETO2Q8NC67 525 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 STAG3L4Q8TBR4 150 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 C10orf82Q8WW14 230 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 RMDN2Q96LZ7 410 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 YY1AP1Q9H869 796 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 CYP4F12Q9HCS2 524 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 CLGNO14967 610 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 VAV1P15498 845 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 RAG1P15918 1043 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 HSPA13P48723 471 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 ATP6V0D1P61421 351 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 SLC34A1Q06495 639 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 FLOT2Q14254 428 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 AASDHQ4L235 1098 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 FSTL4Q6MZW2 842 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 FAM9CQ8IZT9 166 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 MPP5Q8N3R9 675 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 OLIG1Q8TAK6 271 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 KCTD4Q8WVF5 259 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 MECRQ9BV79 373 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 RHOBTB2Q9BYZ6 727 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 FBXO6Q9NRD1 293 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-208ENST00000490993 LATS2Q9NRM7 1088 aa7.42□□□□□ -1.22
NPHP3-208ENST00000490993 MYADML2A6NDP7 307 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SKAP2O75563 359 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RPP40O75818 363 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 GAD2Q05329 585 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 BCL2L1Q07817 233 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 KLC1Q07866 573 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TBL3Q12788 808 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 FER1L6Q2WGJ9 1857 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 STEAP4Q687X5 459 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 PRMT9Q6P2P2 845 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 FBXO39Q8N4B4 442 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 DBF4BQ8NFT6 615 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 OVCA2Q8WZ82 227 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CASP10Q92851 521 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 FOPNLQ96NB1 174 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RNPEPL1Q9HAU8 725 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 DYRK4Q9NR20 520 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SPG21Q9NZD8 308 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 ARMCX1Q9P291 453 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF212Q9UDV6 495 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 AGO1Q9UL18 857 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TBC1D30Q9Y2I9 924 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 VWA7Q9Y334 891 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RBBP6Q7Z6E9 1792 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 KIF13BQ9NQT8 1826 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TRAV19A0A0A6YYK7 116 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 A0A1W2PQ45 241 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 A0A1W2PQY0 241 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SLC7A4O43246 635 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 BEST1O76090 585 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 NDST3O95803 873 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CCDC166P0CW27 439 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TFE3P19532 575 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 PRDX6P30041 224 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CCL23P55773 120 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 MRPS35P82673 323 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 GPR17Q13304 367 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CNGA3Q16281 694 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TSTD2Q5T7W7 516 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 ANKS6Q68DC2 871 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 PM20D1Q6GTS8 502 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 FAM171BQ6P995 826 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TTC23LQ6PF05 361 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms