RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 PGBD5Q8N414 524 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 RAB7BQ96AH8 199 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 ZNF419Q96HQ0 510 aaPredicted RBP16.03■□□□□ 0.16
TRA2A-208ENST00000490942 ZDHHC6Q9H6R6 413 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 ATP13A3Q9H7F0 1226 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 DYRK4Q9NR20 520 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 FBXL12Q9NXK8 326 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.03■□□□□ 0.16
TRA2A-208ENST00000490942 RNF14Q9UBS8 474 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 SARDHQ9UL12 918 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 SAR1BQ9Y6B6 198 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 MUC6Q6W4X9 2439 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 H7C0C1 242 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-208ENST00000490942 MID1O15344 667 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 RPP40O75818 363 aaKnown RBP16.02■□□□□ 0.16
TRA2A-208ENST00000490942 STK10O94804 968 aaKnown RBP16.02■□□□□ 0.16
TRA2A-208ENST00000490942 HLA-DQB2P05538 268 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 PTPN3P26045 913 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 CD6P30203 668 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 CXCR5P32302 372 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 RGRP47804 291 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 ATP5OP48047 213 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 PSMD8P48556 350 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 SCNN1BP51168 640 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 WASHC5Q12768 1159 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 ZBTB17Q13105 803 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-208ENST00000490942 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 BRAT1Q6PJG6 821 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 CNTD1Q8N815 330 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 ECHDC3Q96DC8 303 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.16
TRA2A-208ENST00000490942 EXOC2Q96KP1 924 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 OMDQ99983 421 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 TPSD1Q9BZJ3 242 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 SUV39H2Q9H5I1 410 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 NT5MQ9NPB1 228 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 SCUBE2Q9NQ36 999 aa16.02■□□□□ 0.16
TRA2A-208ENST00000490942 EVLQ9UI08 416 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-208ENST00000490942 IGHV1OR15-9A0A0B4J2B8 117 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 TCRBV7S2A1N4TA0A589 114 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 C5orf60A6NFR6 353 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 PGRMC1O00264 195 aaKnown RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 KPNA3O00505 521 aaPredicted RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 HTRA2O43464 458 aaPredicted RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 LIASO43766 372 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 ITGAVP06756 1048 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 CA4P22748 312 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 DRD3P35462 400 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 PXNP49023 591 aaPredicted RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 NEK3P51956 506 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 POLR2LP62875 67 aaKnown RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 BCL2L1Q07817 233 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 OASLQ15646 514 aaKnown RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 ITPRIPL1Q6GPH6 555 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 NEK5Q6P3R8 708 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 DARS2Q6PI48 645 aaKnown RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 ERN2Q76MJ5 926 aaKnown RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 HDDC3Q8N4P3 179 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 AADATQ8N5Z0 425 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 CADM4Q8NFZ8 388 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 ARRDC2Q8TBH0 407 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 GRIN3AQ8TCU5 1115 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 RTP4Q96DX8 246 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 SEMA3CQ99985 751 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 BTBD1Q9H0C5 482 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 SLC25A51Q9H1U9 297 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 SLC6A17Q9H1V8 727 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 USP29Q9HBJ7 922 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 VPS45Q9NRW7 570 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 WSB2Q9NYS7 404 aaPredicted RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 DRG1Q9Y295 367 aaKnown RBP16.01■□□□□ 0.15
TRA2A-208ENST00000490942 PLXND1Q9Y4D7 1925 aa16.01■□□□□ 0.15
TRA2A-208ENST00000490942 C10orf142B7Z368 130 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 H0Y858 1186 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 RNF103O00237 685 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 TRAFD1O14545 582 aaPredicted RBP16■□□□□ 0.15
TRA2A-208ENST00000490942 AP1G1O43747 822 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 OPHN1O60890 802 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 RNASEH2AO75792 299 aaKnown RBP16■□□□□ 0.15
TRA2A-208ENST00000490942 UGT2B4P06133 528 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 SERPINF2P08697 491 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 NFKBIAP25963 317 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 RBL1P28749 1068 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 NBL1P41271 181 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 RPL26P61254 145 aaKnown RBP16■□□□□ 0.15
TRA2A-208ENST00000490942 AGBL4Q5VU57 503 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
TRA2A-208ENST00000490942 OR6K2Q8NGY2 324 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 TADA1Q96BN2 335 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 IMP4Q96G21 291 aaKnown RBP16■□□□□ 0.15
TRA2A-208ENST00000490942 SPATA13Q96N96 652 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 FCRL5Q96RD9 977 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 EPC1Q9H2F5 836 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 NOD2Q9HC29 1040 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 GLOD4Q9HC38 313 aa16■□□□□ 0.15
TRA2A-208ENST00000490942 KLHL8Q9P2G9 620 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms