RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ATXN7L2Q5T6C5 722 aaPredicted RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 NAPEPLDQ6IQ20 393 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 LINC00523Q86TU6 105 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 TXNDC5Q8NBS9 432 aaKnown RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 PJA1Q8NG27 643 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 MRGPRX3Q96LB0 322 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 FCRL5Q96RD9 977 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 ADGRE3Q9BY15 652 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 TMEM245Q9H330 911 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 LRRC40Q9H9A6 602 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 FBRSL1Q9HCM7 1045 aaKnown RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 LHX3Q9UBR4 397 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 IL36AQ9UHA7 158 aa11.09□□□□□ -0.63
VARS2-210ENST00000490699 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
VARS2-210ENST00000490699 PRUNE2Q8WUY3 3088 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 RAD51CO43502 376 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 SIN3BO75182 1162 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 HEXIM1O94992 359 aaKnown RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 ADH1BP00325 375 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 APRTP07741 180 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 CHRNB1P11230 501 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 ACADMP11310 421 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 HLA-EP13747 358 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 PRKCHP24723 683 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 RPL22P35268 128 aaKnown RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 WASP42768 502 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 DGKEP52429 567 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 POLR2LP62875 67 aaKnown RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 CDK16Q00536 496 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 DSC2Q02487 901 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 CAV1Q03135 178 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 MESP2Q0VG99 397 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 TTC31Q49AM3 519 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 EMC10Q5UCC4 262 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 ZNF776Q68DI1 518 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 ALG1LQ6GMV1 187 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 TRIM67Q6ZTA4 783 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 CEP128Q6ZU80 1094 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 PPIL6Q8IXY8 311 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 IFT20Q8IY31 132 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 TAB3Q8N5C8 712 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 CNTD1Q8N815 330 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 IL17RCQ8NAC3 791 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 GRIN3AQ8TCU5 1115 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 PDCD6IPQ8WUM4 868 aaKnown RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 RUBCNQ92622 972 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 IMP4Q96G21 291 aaKnown RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 ZNF641Q96N77 438 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 RBM15Q96T37 977 aaKnown RBP eCLIP11.08□□□□□ -0.64
VARS2-210ENST00000490699 GABRG3Q99928 467 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 ERP44Q9BS26 406 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 FRMD8Q9BZ67 464 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 FAM129AQ9BZQ8 928 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 TRIM31Q9BZY9 425 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 FAM114A2Q9NRY5 505 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 BCCIPQ9P287 314 aaKnown RBP eCLIP11.08□□□□□ -0.64
VARS2-210ENST00000490699 EVLQ9UI08 416 aaPredicted RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
VARS2-210ENST00000490699 MMP17Q9ULZ9 603 aa11.08□□□□□ -0.64
VARS2-210ENST00000490699 CHURC1-FNTBB4DL54 471 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 F5H423 210 aaPredicted RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 KPNA3O00505 521 aaPredicted RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 PMPCBO75439 489 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 CD160O95971 181 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 IL1BP01584 269 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 DNTTP04053 509 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 TUBBP07437 444 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 RHOXF2BP0C7M4 288 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 ZSCAN5DPP0CG00 497 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 ITIH2P19823 946 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 PTGIRP43119 386 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 RPS9P46781 194 aaKnown RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 CAMK2GQ13555 558 aaPredicted RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 SEMA5AQ13591 1074 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 ENPP2Q13822 863 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 PCSK7Q16549 785 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 IZUMO3Q5VZ72 239 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 BRAT1Q6PJG6 821 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 GDPD4Q6W3E5 623 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 DPY19L3Q6ZPD9 716 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 HOOK3Q86VS8 718 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 SFTPA1Q8IWL2 248 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 ZNF366Q8N895 744 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 DNAAF3Q8N9W5 541 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 NOA1Q8NC60 698 aaKnown RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 IPMKQ8NFU5 416 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 OR2A12Q8NGT7 310 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 OR6K2Q8NGY2 324 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 OR2T3Q8NH03 318 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 GANCQ8TET4 914 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 FRS2Q8WU20 508 aa11.07□□□□□ -0.64
VARS2-210ENST00000490699 PRCCQ92733 491 aaPredicted RBP11.07□□□□□ -0.64
VARS2-210ENST00000490699 PTPRN2Q92932 1015 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms