RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 UBA2Q9UBT2 640 aaPredicted RBP10.51□□□□□ -0.73
RBM39-236ENST00000490484 SCINQ9Y6U3 715 aa10.51□□□□□ -0.73
RBM39-236ENST00000490484 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
RBM39-236ENST00000490484 TMEM191CA6NGB0 347 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 IGLON5A6NGN9 336 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 GOLGA6L19H0YKK7 550 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 FFAR2O15552 330 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 SPINT1O43278 529 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 AP1G1O43747 822 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 PRPSAP2O60256 369 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 RFPL3O75679 317 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 RNF8O76064 485 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 PIGNO95427 931 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 POP4O95707 220 aaKnown RBP10.5□□□□□ -0.73
RBM39-236ENST00000490484 PAK4O96013 591 aaPredicted RBP10.5□□□□□ -0.73
RBM39-236ENST00000490484 MYBL1P10243 752 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 GZMAP12544 262 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 MIPP30301 263 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 HTR7P34969 479 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 ACADVLP49748 655 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 UBASH3AP57075 661 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 MYLK3Q32MK0 819 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 FIGNQ5HY92 759 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 GDPD4Q6W3E5 623 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 KYAT3Q6YP21 454 aaKnown RBP10.5□□□□□ -0.73
RBM39-236ENST00000490484 KDM7AQ6ZMT4 941 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 Q6ZSR6 202 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 RFX8Q6ZV50 586 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 CYP4V2Q6ZWL3 525 aaPredicted RBP10.5□□□□□ -0.73
RBM39-236ENST00000490484 KANSL1Q7Z3B3 1105 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 ABI3BPQ7Z7G0 1075 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 GALNT15Q8N3T1 639 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 NPWQ8N729 165 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 FNIP1Q8TF40 1166 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 CASKIN2Q8WXE0 1202 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 RAB7BQ96AH8 199 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 FEM1CQ96JP0 617 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.5□□□□□ -0.73
RBM39-236ENST00000490484 SLC17A9Q9BYT1 436 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 EDEM3Q9BZQ6 932 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 LRRC19Q9H756 370 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 PDFQ9HBH1 243 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 LHX3Q9UBR4 397 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 PLXNB3Q9ULL4 1909 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 TRPM6Q9BX84 2022 aa10.5□□□□□ -0.73
RBM39-236ENST00000490484 DSPP15924 2871 aaKnown RBP10.49□□□□□ -0.73
RBM39-236ENST00000490484 A0A1W2PQJ5 194 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 POM121BA6NF01 834 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 EIF3CLB5ME19 914 aaKnown RBP10.49□□□□□ -0.73
RBM39-236ENST00000490484 J3KR12 359 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 DFFAO00273 331 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 INSIG1O15503 277 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 DAPK3O43293 454 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 TSPAN6O43657 245 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 LRCH4O75427 683 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 PBX1P40424 430 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 NDST2P52849 883 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 CLDN6P56747 220 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 RAD51Q06609 339 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 SGCGQ13326 291 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 SMAD1Q15797 465 aaKnown RBP10.49□□□□□ -0.73
RBM39-236ENST00000490484 SMTNL2Q2TAL5 461 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 ZSCAN23Q3MJ62 389 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 INO80DQ53TQ3 878 aaPredicted RBP10.49□□□□□ -0.73
RBM39-236ENST00000490484 ZNF542PQ5EBM4 170 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 ERMARDQ5T6L9 678 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 HGSNATQ68CP4 663 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 CPLX3Q8WVH0 158 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 ARHGEF26Q96DR7 871 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 BMFQ96LC9 184 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 EIF3CQ99613 913 aaKnown RBP10.49□□□□□ -0.73
RBM39-236ENST00000490484 SLC39A8Q9C0K1 460 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 SP110Q9HB58 689 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 MRPL47Q9HD33 250 aaKnown RBP10.49□□□□□ -0.73
RBM39-236ENST00000490484 KLHL11Q9NVR0 708 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 UCKL1Q9NWZ5 548 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 DNAJC28Q9NX36 388 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 DONSONQ9NYP3 566 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 LAMA5O15230 3695 aa10.49□□□□□ -0.73
RBM39-236ENST00000490484 ARHGAP42A6NI28 874 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 SRRM3A6NNA2 597 aaPredicted RBP10.48□□□□□ -0.73
RBM39-236ENST00000490484 TRIM38O00635 465 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 FPGTO14772 594 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 AREL1O15033 823 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 SIGLEC6O43699 453 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 TCF4P15884 667 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 ERCC2P18074 760 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 ITIH2P19823 946 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 XPAP23025 273 aaPredicted RBP10.48□□□□□ -0.73
RBM39-236ENST00000490484 DGKAP23743 735 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 RABIFP47224 123 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 PAPOLAP51003 745 aaKnown RBP10.48□□□□□ -0.73
RBM39-236ENST00000490484 PDE1CQ14123 709 aaPredicted RBP10.48□□□□□ -0.73
RBM39-236ENST00000490484 CYTH1Q15438 398 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 PROX2Q3B8N5 592 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 CFAP58Q5T655 872 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 ARHGAP36Q6ZRI8 547 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 TTC7BQ86TV6 843 aa10.48□□□□□ -0.73
RBM39-236ENST00000490484 VPS36Q86VN1 386 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms