RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PROSER1Q86XN7 944 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 DCP2Q8IU60 420 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PSTKQ8IV42 348 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 GALNT15Q8N3T1 639 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 GRIN3AQ8TCU5 1115 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 FEM1CQ96JP0 617 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 MCEEQ96PE7 176 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 OSBPL1AQ9BXW6 950 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 CPEB1Q9BZB8 566 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 ISCUQ9H1K1 167 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 LRRC19Q9H756 370 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PDFQ9HBH1 243 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 DYRK4Q9NR20 520 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PARVAQ9NVD7 372 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 DKK3Q9UBP4 350 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 FTSJ1Q9UET6 329 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 HPCAL4Q9UM19 191 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 ANKRD62A6NC57 917 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 LRRC53A6NM62 1247 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 C16orf96A6NNT2 1141 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 RASA4BC9J798 803 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 TRIM38O00635 465 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 RAD51BO15315 384 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 FGF10O15520 208 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 RASA4O43374 803 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 TMCC1O94876 653 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 PAK4O96013 591 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 FTLP02792 175 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 THEGLP0DJG4 465 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 DGKAP23743 735 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 AKT2P31751 481 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 GKP32189 559 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 ABL2P42684 1182 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 HCAR3P49019 387 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 NDST2P52849 883 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 PFN3P60673 137 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 SNRPD1P62314 119 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF211Q13398 564 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 CYTH1Q15438 398 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 FBXL19Q6PCT2 694 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 DCUN1D2Q6PH85 259 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 TMC6Q7Z403 805 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 SLC22A18ASQ8N1D0 253 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 EID2Q8N6I1 236 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 OR13H1Q8NG92 308 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 HCAR2Q8TDS4 363 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 RFFLQ8WZ73 363 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 SYN2Q92777 582 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 KLK6Q92876 244 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 CENPTQ96BT3 561 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 HMCESQ96FZ2 354 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 CNDP2Q96KP4 475 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 TM6SF2Q9BZW4 377 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 HAUS4Q9H6D7 363 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 CATSPERBQ9H7T0 1116 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 DONSONQ9NYP3 566 aa9.87□□□□□ -0.83
TMEM39A-210ENST00000490099 DSPP15924 2871 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 SPTY2D1-AS1A0A0U1RR47 76 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 TSPAN11A1L157 253 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 POM121BA6NF01 834 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 TRABD2BA6NFA1 517 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 IGLON5A6NGN9 336 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 BUB1O43683 1085 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 PCDH8O95206 1070 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 TIMP2P16035 220 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 CKMT2P17540 419 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ACP1P24666 158 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 CSNK1DP48730 415 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 DNA2P51530 1060 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 SUOXP51687 545 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 CLDN2P57739 230 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 FZD2Q14332 565 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 CA9Q16790 459 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 FILIP1LQ4L180 1135 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ATXN7L2Q5T6C5 722 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 HGSNATQ68CP4 663 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 CAVIN1Q6NZI2 390 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 SCYL2Q6P3W7 929 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 DHRS13Q6UX07 377 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 KYAT3Q6YP21 454 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 Q6ZSR6 202 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ARHGAP12Q8IWW6 846 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 FAM181AQ8N9Y4 354 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 DENND6BQ8NEG7 585 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ARHGEF26Q96DR7 871 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 PEBP4Q96S96 227 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 TRIM7Q9C029 511 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 SEPT11Q9NVA2 429 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 LHX3Q9UBR4 397 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 FREM2Q5SZK8 3169 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 TP53BP1Q12888 1972 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ASXL3Q9C0F0 2248 aa9.86□□□□□ -0.83
TMEM39A-210ENST00000490099 ASPMQ8IZT6 3477 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 CACNA1GO43497 2377 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 A0A1W2PQJ5 194 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 A6NNZ2 444 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 KRIT1O00522 736 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 SIGLEC6O43699 453 aa9.85□□□□□ -0.83
TMEM39A-210ENST00000490099 PRAMEF11O60813 436 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms