RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 ITKQ08881 620 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 KCTD19Q17RG1 926 aaPredicted RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 P3H1Q32P28 736 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 ARSIQ5FYB1 569 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 RALGPS1Q5JS13 557 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 PRPF39Q86UA1 669 aaKnown RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 TMPRSS6Q8IU80 811 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 MMAAQ8IVH4 418 aaKnown RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 MAML2Q8IZL2 1156 aaPredicted RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 RYBPQ8N488 228 aaPredicted RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 DTWD2Q8NBA8 298 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 TMIEQ8NEW7 156 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 TSTD1Q8NFU3 115 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 ATL2Q8NHH9 583 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 FCRL5Q96RD9 977 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 TUBGCP5Q96RT8 1024 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 GORASP1Q9BQQ3 440 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 CPEB1Q9BZB8 566 aaKnown RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 SLC25A51Q9H1U9 297 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 GBA3Q9H227 469 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 ZDHHC6Q9H6R6 413 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 POLMQ9NP87 494 aaPredicted RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 PCYOX1Q9UHG3 505 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 NEU2Q9Y3R4 380 aa16.29■□□□□ 0.2
CLIC4-203ENST00000489758 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
CLIC4-203ENST00000489758 PIGNO95427 931 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 PRNPP04156 253 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 TDGF1P13385 188 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 CES1P23141 567 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 PTGIRP43119 386 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 CKAP4Q07065 602 aaKnown RBP16.28■□□□□ 0.2
CLIC4-203ENST00000489758 CST6Q15828 149 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 ZNF776Q68DI1 518 aaPredicted RBP16.28■□□□□ 0.2
CLIC4-203ENST00000489758 DSG4Q86SJ6 1040 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 RASSF3Q86WH2 238 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 C1orf210Q8IVY1 113 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLIC4-203ENST00000489758 MDGA1Q8NFP4 955 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 SLCO2A1Q92959 643 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 LRIG1Q96JA1 1093 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
CLIC4-203ENST00000489758 TRAFD1O14545 582 aaPredicted RBP16.27■□□□□ 0.2
CLIC4-203ENST00000489758 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.2
CLIC4-203ENST00000489758 METTL18O95568 372 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 APBB3O95704 486 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 IFNB1P01574 187 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 IL1BP01584 269 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 HOXA6P31267 233 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.2
CLIC4-203ENST00000489758 CD86P42081 329 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 PSMD8P48556 350 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 LMNB2Q03252 620 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 RAD51Q06609 339 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 C2orf54Q08AI8 447 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 TRAF2Q12933 501 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 GRM3Q14832 879 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 ITPRIPL1Q6GPH6 555 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 ANO7Q6IWH7 933 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 GDPD4Q6W3E5 623 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 GSTA5Q7RTV2 222 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 ALYREFQ86V81 257 aaKnown RBP16.27■□□□□ 0.2
CLIC4-203ENST00000489758 CACUL1Q86Y37 369 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 CAMK1DQ8IU85 385 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 KLHL7Q8IXQ5 586 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 KLHDC8BQ8IXV7 354 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 CAMKK1Q8N5S9 505 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 CCDC89Q8N998 374 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 SPATA22Q8NHS9 363 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 HMGB4Q8WW32 186 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 OXNAD1Q96HP4 312 aaPredicted RBP16.27■□□□□ 0.2
CLIC4-203ENST00000489758 ZNF641Q96N77 438 aaPredicted RBP16.27■□□□□ 0.2
CLIC4-203ENST00000489758 RBM15Q96T37 977 aaKnown RBP eCLIP16.27■□□□□ 0.24e-6■□□□□ 8.6
CLIC4-203ENST00000489758 OSBPL1AQ9BXW6 950 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 KCNH6Q9H252 994 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 ATP13A3Q9H7F0 1226 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 EBF1Q9UH73 591 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
CLIC4-203ENST00000489758 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 TSPAN11A1L157 253 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 F5H423 210 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 MID1O15344 667 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 HTRA2O43464 458 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 ECEL1O95672 775 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 MT-CYBP00156 380 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 ADH1BP00325 375 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 UGT2B4P06133 528 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 PSMB4P28070 264 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 SLC8A1P32418 973 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 ZBTB16Q05516 673 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 DMWDQ09019 674 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 SLC14A2Q15849 920 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 PARP6Q2NL67 630 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 KDELC1Q6UW63 502 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 ARHGEF18Q6ZSZ5 1173 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 AADATQ8N5Z0 425 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 FAM131CQ96AQ9 280 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 ARRDC3Q96B67 414 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms