RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 MGME1Q9BQP7 344 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 NEUROG2Q9H2A3 272 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 SCUBE2Q9NQ36 999 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ITM2CQ9NQX7 267 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ZSCAN32Q9NX65 697 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 A0A0U1RQS6 177 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 CTAGE9A4FU28 777 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PRR23AA6NEV1 266 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 FAM47DPA6NHR8 397 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 HACD1B0YJ81 288 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PDE2AO00408 941 aaPredicted RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 KCNN4O15554 427 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 LIASO43766 372 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 RPP40O75818 363 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 NEBLO76041 1014 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ADH1BP00325 375 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PRNPP04156 253 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 MMP2P08253 660 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ETS1P14921 441 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 NFKB1P19838 968 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 C5AR1P21730 350 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 ABL2P42684 1182 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 KCNJ1P48048 391 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 NUBP1P53384 320 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ETF1P62495 437 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 TRAF2Q12933 501 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 XRCC4Q13426 336 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ZNF528Q3MIS6 628 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 USP39Q53GS9 565 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 TEX44Q53QW1 395 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PIP5KL1Q5T9C9 394 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 AGBL4Q5VU57 503 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PAPD7Q5XG87 772 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 GDPD4Q6W3E5 623 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 NYAP1Q6ZVC0 841 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 PARS2Q7L3T8 475 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 ARMCX6Q7L4S7 300 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 DSG4Q86SJ6 1040 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 KBTBD6Q86V97 674 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ZNF567Q8N184 647 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 RASGEF1CQ8N431 466 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PRELID2Q8N945 189 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 FAM71DQ8N9W8 422 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 TMIEQ8NEW7 156 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 SPATA22Q8NHS9 363 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 CCDC110Q8TBZ0 833 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ATOH1Q92858 354 aaPredicted RBP8.38□□□□□ -1.07
SF1-218ENST00000489544 FATE1Q969F0 183 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PBKQ96KB5 322 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 NUDCD1Q96RS6 583 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 OMDQ99983 421 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 TMEM121Q9BTD3 319 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 GPR174Q9BXC1 333 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 BRD8Q9H0E9 1235 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 SUV39H2Q9H5I1 410 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 FBRSQ9HAH7 460 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 USP29Q9HBJ7 922 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 UBP1Q9NZI7 540 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ITM2BQ9Y287 266 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 ATP8A1Q9Y2Q0 1164 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
SF1-218ENST00000489544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 BCLAF3A2AJT9 711 aaKnown RBP8.37□□□□□ -1.07
SF1-218ENST00000489544 C16orf96A6NNT2 1141 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 C1QTNF3-AMACRE9PGA6 284 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 TRAFD1O14545 582 aaPredicted RBP8.37□□□□□ -1.07
SF1-218ENST00000489544 ALOX15BO15296 676 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 SPINT1O43278 529 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 LILRB5O75023 590 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 MT-CYBP00156 380 aaPredicted RBP8.37□□□□□ -1.07
SF1-218ENST00000489544 PDHA1P08559 390 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 C7P10643 843 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 TIMP2P16035 220 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 CD6P30203 668 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 CASQ1P31415 396 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 CD86P42081 329 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 CSNK1DP48730 415 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 TAS2R38P59533 333 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 AP1S1P61966 158 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 SKOR1P84550 965 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 ZBTB16Q05516 673 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 RAD51Q06609 339 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 ZNF33AQ06730 810 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 BCL2L1Q07817 233 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 NSUN2Q08J23 767 aaKnown RBP eCLIP8.37□□□□□ -1.07
SF1-218ENST00000489544 NUMA1Q14980 2115 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 OASLQ15646 514 aaKnown RBP8.37□□□□□ -1.07
SF1-218ENST00000489544 TTC31Q49AM3 519 aaPredicted RBP8.37□□□□□ -1.07
SF1-218ENST00000489544 ZNF805Q5CZA5 627 aa8.37□□□□□ -1.07
SF1-218ENST00000489544 FAM46CQ5VWP2 391 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms