RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 STEAP4Q687X5 459 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 HEATR6Q6AI08 1181 aaKnown RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 SDE2Q6IQ49 451 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 SLC8B1Q6J4K2 584 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZNF280DQ6N043 979 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 C1orf228Q6PIY5 440 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 RGS9BPQ6ZS82 235 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZNF534Q76KX8 674 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 TRABD2AQ86V40 505 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZC3H18Q86VM9 953 aaKnown RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 CAND1Q86VP6 1230 aaKnown RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 MON1AQ86VX9 555 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 LRRC49Q8IUZ0 686 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 CCDC13Q8IYE1 715 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZBED8Q8IZ13 594 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 VPS52Q8N1B4 723 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 NUP93Q8N1F7 819 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 PYROXD2Q8N2H3 581 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 SLC7A14Q8TBB6 771 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZSCAN18Q8TBC5 510 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 SPPL2BQ8TCT7 592 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 DENND1AQ8TEH3 1009 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 PYROXD1Q8WU10 500 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 HTR3CQ8WXA8 447 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ARHGEF2Q92974 986 aaKnown RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 HDAC11Q96DB2 347 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 VWCEQ96DN2 955 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 P2RY11Q96G91 374 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 C1orf74Q96LT6 269 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZNF317Q96PQ6 595 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 XPO6Q96QU8 1125 aaKnown RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 TMEM209Q96SK2 561 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 CYTH2Q99418 400 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 VAT1Q99536 393 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 FERMT1Q9BQL6 677 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 TTLL2Q9BWV7 592 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 FBXO44Q9H4M3 255 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 RETREG1Q9H6L5 497 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 C10orf88Q9H8K7 445 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 DDIT4Q9NX09 232 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 PSMC3IPQ9P2W1 217 aaPredicted RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 XPO7Q9UIA9 1087 aaKnown RBP5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ZNF180Q9UJW8 692 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ADAMTS6Q9UKP5 1117 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 ADAM28Q9UKQ2 775 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 TRHDEQ9UKU6 1024 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 TBX21Q9UL17 535 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 TRIM17Q9Y577 477 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 PCDHB7Q9Y5E2 793 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 HEY1Q9Y5J3 304 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 BACE2Q9Y5Z0 518 aa5.68□□□□□ -1.5
ATG4A-208ENST00000489247 EXOC1LA0A1B0GW35 172 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 GMNCA6NCL1 334 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 FAM72CH0Y354 149 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 H7C4K7 107 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 TYROBPO43914 113 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 SUSD5O60279 629 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 TADA2AO75478 443 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 ALDH1A2O94788 518 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 RTN3O95197 1032 aaPredicted RBP5.67□□□□□ -1.5
ATG4A-208ENST00000489247 VNN2O95498 520 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 IGLV3-27P01718 113 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 AMHP03971 560 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 ALDH2P05091 517 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 GALTP07902 379 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 SLC2A3P11169 496 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 CCL5P13501 91 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 NCAM1P13591 858 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 ATP2A2P16615 1042 aaKnown RBP5.67□□□□□ -1.5
ATG4A-208ENST00000489247 YY1P25490 414 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 CCR1P32246 355 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 HPDP32754 393 aaPredicted RBP5.67□□□□□ -1.5
ATG4A-208ENST00000489247 STX2P32856 288 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 OR1G1P47890 313 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 IFNAR2P48551 515 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 SLC11A1P49279 550 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 GEMIN4P57678 1058 aaKnown RBP5.67□□□□□ -1.5
ATG4A-208ENST00000489247 TPI1P60174 286 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 BASP1P80723 227 aaKnown RBP5.67□□□□□ -1.5
ATG4A-208ENST00000489247 COG7P83436 770 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 GAD2Q05329 585 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 IKZF1Q13422 519 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 NAB1Q13506 487 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 PLCL1Q15111 1095 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 BBS9Q3SYG4 887 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 PAN2Q504Q3 1202 aaKnown RBP5.67□□□□□ -1.5
ATG4A-208ENST00000489247 ANKRD20A2Q5SQ80 823 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 FAM72AQ5TYM5 149 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 ANKRD20A1Q5TYW2 823 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 ANKRD20A3Q5VUR7 823 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 SNX30Q5VWJ9 437 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 KCTD11Q693B1 232 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 FAM72DQ6L9T8 149 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 FUT10Q6P4F1 479 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 LRRC8BQ6P9F7 803 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 SLC39A5Q6ZMH5 540 aa5.67□□□□□ -1.5
ATG4A-208ENST00000489247 SH2D5Q6ZV89 423 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms