RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TAS2R38P59533 333 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 RPS21P63220 83 aaKnown RBP14.48□□□□□ -0.09
BRCA1-218ENST00000489037 SUZ12Q15022 739 aaKnown RBP14.48□□□□□ -0.09
BRCA1-218ENST00000489037 KIF19Q2TAC6 998 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 HLA-BQ31612 363 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 KIAA1161Q6NSJ0 714 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 PARS2Q7L3T8 475 aaKnown RBP14.48□□□□□ -0.09
BRCA1-218ENST00000489037 HORMAD1Q86X24 394 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 GAS2L3Q86XJ1 694 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 ARHGAP12Q8IWW6 846 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 ATPAF2Q8N5M1 289 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 NPWQ8N729 165 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 OR2I1PQ8NGU4 316 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF599Q96NL3 588 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 ORAI3Q9BRQ5 295 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 CPEB1Q9BZB8 566 aaKnown RBP14.48□□□□□ -0.09
BRCA1-218ENST00000489037 PDFQ9HBH1 243 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 LHX3Q9UBR4 397 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 SEPT3Q9UH03 358 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 SNX11Q9Y5W9 270 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 GOLGA6L6A8MZA4 724 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 UPK3BL1B0FP48 263 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 UPK3BL2E5RIL1 263 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 SLC31A1O15431 190 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 TSPAN6O43657 245 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 AP1G1O43747 822 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 MTA2O94776 668 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF883P0CG24 379 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 CEACAM1P13688 526 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 AKT2P31751 481 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 SLC1A1P43005 524 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 CSNK1DP48730 415 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 SUOXP51687 545 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 HNRNPDQ14103 355 aaKnown RBP14.47□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF235Q14590 738 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 PSAPL1Q6NUJ1 521 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 TTC7BQ86TV6 843 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 TMTC1Q8IUR5 882 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 LRRC49Q8IUZ0 686 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 MFSD2AQ8NA29 543 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 NETO2Q8NC67 525 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 TSC1Q92574 1164 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 EXOC2Q96KP1 924 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF670Q9BS34 389 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 EBF2Q9HAK2 575 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 TM7SF3Q9NS93 570 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 PCDHB9Q9Y5E1 797 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 FADS3Q9Y5Q0 445 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 SLCO1B1Q9Y6L6 691 aa14.47□□□□□ -0.09
BRCA1-218ENST00000489037 CACNA1AO00555 2505 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 HNRNPA2B1P22626 353 aaKnown RBP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 HSPA9P38646 679 aaKnown RBP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 TAS2R40P59535 323 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 NSUN2Q08J23 767 aaKnown RBP eCLIP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 OVGP1Q12889 678 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 MMRN1Q13201 1228 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 SGCGQ13326 291 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 DPYSL3Q14195 570 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 LBRQ14739 615 aaKnown RBP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 ATP13A4Q4VNC1 1196 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 ANKRD20A8PQ5CZ79 823 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 SRLQ86TD4 932 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 IQCHQ86VS3 1027 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 DEFB124Q8NES8 71 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 FAM71BQ8TC56 605 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 HCAR2Q8TDS4 363 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 KLK6Q92876 244 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 KLHDC7BQ96G42 594 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF641Q96N77 438 aaPredicted RBP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 TUBGCP5Q96RT8 1024 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 MAK16Q9BXY0 300 aaKnown RBP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 SUV39H2Q9H5I1 410 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 ATP13A3Q9H7F0 1226 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 GDF3Q9NR23 364 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 ETNK2Q9NVF9 386 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 HAUS2Q9NVX0 235 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 DKK3Q9UBP4 350 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 PCDHA13Q9Y5I0 950 aa14.46□□□□□ -0.09
BRCA1-218ENST00000489037 TDRD6O60522 2096 aaKnown RBP14.46□□□□□ -0.09
BRCA1-218ENST00000489037 A0A1W2PR77 199 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 C10orf142B7Z368 130 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 TLR4O00206 839 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 RNF103O00237 685 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 INSIG1O15503 277 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 SPOPO43791 374 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 NEBLO76041 1014 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 LCA5LO95447 670 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 CD48P09326 243 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 KDELR1P24390 212 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 SERPINA4P29622 427 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 CTSKP43235 329 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 CCT8P50990 548 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 ARSEP51690 589 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 BNC1Q01954 994 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 BCL2L1Q07817 233 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 ELP6Q0PNE2 266 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 TCEAL1Q15170 157 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 ZNF284Q2VY69 593 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 INAVAQ3KP66 663 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 LAYNQ6UX15 382 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms