RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RBM15Q96T37 977 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLDN11-208ENST00000488989 LRRC40Q9H9A6 602 aa16.22■□□□□ 0.19
CLDN11-208ENST00000488989 NOD2Q9HC29 1040 aa16.22■□□□□ 0.19
CLDN11-208ENST00000488989 SCUBE2Q9NQ36 999 aa16.22■□□□□ 0.19
CLDN11-208ENST00000488989 NFU1Q9UMS0 254 aa16.22■□□□□ 0.19
CLDN11-208ENST00000488989 SLC8A2Q9UPR5 921 aa16.22■□□□□ 0.19
CLDN11-208ENST00000488989 TTC34A8MYJ7 566 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 E7EVH7 732 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 F5H423 210 aaPredicted RBP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 PPFIA2O75334 1257 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 GJB3O75712 270 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 EPOP01588 193 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 MLNP12872 115 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 MAGEA3P43357 314 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 KIR2DL1P43626 348 aaPredicted RBP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 PRKCQQ04759 706 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 HLTFQ14527 1009 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 ZNF234Q14588 700 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 PON2Q15165 354 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 MLF2Q15773 248 aaPredicted RBP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 ATXN7L2Q5T6C5 722 aaPredicted RBP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 FSTL4Q6MZW2 842 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 PPP1R21Q6ZMI0 780 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 ZNF534Q76KX8 674 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 PTPRN2Q92932 1015 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 ASB2Q96Q27 587 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 FMO2Q99518 471 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 CPEB1Q9BZB8 566 aaKnown RBP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 TM6SF2Q9BZW4 377 aa16.21■□□□□ 0.19
CLDN11-208ENST00000488989 MTRF1LQ9UGC7 380 aaKnown RBP16.21■□□□□ 0.19
CLDN11-208ENST00000488989 MYLKQ15746 1914 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 LOC285095A0A1B0GVY8 99 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 TTC24A2A3L6 582 aaPredicted RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 CCDC151A5D8V7 595 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 MAN2B1O00754 1011 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 WNT3AP56704 352 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 SARNPP82979 210 aaKnown RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 GRM3Q14832 879 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 BRD3Q15059 726 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 MYLK3Q32MK0 819 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 HNRNPA1L2Q32P51 320 aaKnown RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 ACCSLQ4AC99 568 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 EGFLAMQ63HQ2 1017 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 NAPEPLDQ6IQ20 393 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 LRRC8BQ6P9F7 803 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 RANBP10Q6VN20 620 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 LINC00523Q86TU6 105 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 CAND1Q86VP6 1230 aaKnown RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 OR2A12Q8NGT7 310 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 FEM1CQ96JP0 617 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 SERPINB12Q96P63 405 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 TUBGCP5Q96RT8 1024 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 TRIB3Q96RU7 358 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 TSPYL1Q9H0U9 437 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 TNKS2Q9H2K2 1166 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 ARNT2Q9HBZ2 717 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 XAB2Q9HCS7 855 aaKnown RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 CASS4Q9NQ75 786 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 UBP1Q9NZI7 540 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 WNT16Q9UBV4 365 aa16.2■□□□□ 0.18
CLDN11-208ENST00000488989 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
CLDN11-208ENST00000488989 EDDM13A0A1B0GTR0 161 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 E7ESA3 106 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 AP3B1O00203 1094 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 HTRA2O43464 458 aaPredicted RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 FZD6O60353 706 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 SOCS5O75159 536 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 PMPCBO75439 489 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 POP4O95707 220 aaKnown RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 EGFP01133 1207 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 IL12RB1P42701 662 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 LMAN1P49257 510 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 CCNHP51946 323 aaPredicted RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 GRSF1Q12849 480 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 FBXO43Q4G163 708 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 FNDC3BQ53EP0 1204 aaKnown RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 DENND5AQ6IQ26 1287 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 DPY19L3Q6ZPD9 716 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 TPRG1Q6ZUI0 275 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 Q6ZVU0 165 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 RNF135Q8IUD6 432 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 IPMKQ8NFU5 416 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 AENQ8WTP8 325 aaKnown RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 FAM3CQ92520 227 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 SPOCK2Q92563 424 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 TBL1YQ9BQ87 522 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 TDRD1Q9BXT4 1180 aaKnown RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 HECAQ9UBI9 543 aaPredicted RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 SUN2Q9UH99 717 aa16.19■□□□□ 0.18
CLDN11-208ENST00000488989 EVLQ9UI08 416 aaPredicted RBP16.19■□□□□ 0.18
CLDN11-208ENST00000488989 ANTXRLA6NF34 631 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 TRAFD1O14545 582 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 PRLP01236 227 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 H2AFXP16104 143 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 GRIA1P42261 906 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 RECQLP46063 649 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 ARL4CP56559 192 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 MRPS21P82921 87 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms